New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1434028 | 34 (1.210) | 6 (0.220) | 6/234 | NT | 14.9% | coding (363/1248 nt) | PP_1255 | cis‑4‑hydroxy‑D‑proline oxidase |
? | NC_002947 | = 1434082 | 36 (1.340) | coding (309/1248 nt) | PP_1255 | cis‑4‑hydroxy‑D‑proline oxidase |
CCAGAAGTCCACCGGCACCGCCTGCTGTTGCATGCGTGTGCGCAACGCCTCCAGCGCCTGGCGTGACTCAGGCTTCTCGAACACCAGCAACGAACCATCCTCTTGAAACAACTCGCTGCGCCCGATCGAGCCCAACAGCCGTTGCCAGGCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1433875‑1434028 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcccGGCGCCGTTCCAGCGCAGCGTGGCGGGCATCCGCACGCTGAACGAAGGCAGCCTGGGCGCCTGGCAACGGCTGTTGGGCTCGATCGGGCGCAGCGAGTTGTTTCAAGAGGATGGTTCGTTGCTGGTGTTCGAGAAGCCTGAGTCAC < NC_002947/1434082‑1433937 CCAGAAGTCCACCGGCACCGCCTGCTGTTGCATGCGTGTGCGCAACGCCTCCAGCGCCTGGCGTGACTCAGGCTTCTCGAACACCAGCAACGAACCATCCTCTTGAAACAACTCGCTCCAATATAGCGAGCCCAACAGCCGTTGCCAGGC < 1:209140/150‑1 ATGCGTGTGCGCAACGCCTCCAGCGCCTGGCGTGACTCAGGCTTCTCGAACACCAGCAACGAACCATCCTCTTGAAACAACTCGCTGCGCCCGATCGAGCCCAACAGCCGTTGCCAGGCGCCCGGCGCCGTTCCAGCGCAGCGTGGCGGG > 1:517979/1‑150 TGGCGTGACTCAGGCTTCTCGAACACCAGCAACGAACCATCCTCTTGAAACAACTCGCTGCGCCCGATCGAGCCCAACAGCCGTTGCCAGGCGCCCGGCGCCGTTCCAGCGCAGCGTGGCGGGCATCCGCACGCTGAACGAAGGCAGC > 1:188731/1‑148 TGGCGTGACTCAGGCTTCTCGAACACCAGCAACGAACCATCCTCTTGAAACAACTCGCTGCGCCCGATCGAGCCCAACAGCCGTTGCCAGGCGCCCGGCGCCGTTCCAGCGCAGCGTGGCGGGCATCCGCACGCTGAACGAAGGCAGC < 2:188731/148‑1 CTCAGGCTTCTCGAACACCAGCAACGAACCATCCTCTTGAAACAACTCGCTGCGCCCGATCGAGCCCAACAGCCGTTGCCAGGCGCCCGGCGCCGTTCCAGCGCAGCGTGGCGGGCATCCGCACGCTGAACGAAGGCAGCCTGGGCGCCT < 2:517979/150‑1 ATCCTCTTGAAACAACTCGCTGCGCCCGATCGAGCCCAACAGCCGTTGCCAGGCGCCCGGCGCCGTTCCAGCGCAGCGTGGCGGGCATCCGCACGCTGAACGAAGGCAGCCTG > 1:65007/1‑113 ATCCTCTTGAAACAACTCGCTGCGCCCGATCGAGCCCAACAGCCGTTGCCAGGCGCCCGGCGCCGTTCCAGCGCAGCGTGGCGGGCATCCGCACGCTGAACGAAGGCAGCCTG < 2:65007/113‑1 GCCCGGCGCCGTTCCAGCGCAGCGTGGCGGGCATCCGCACGCTGAACGAAGGCAGCCTGGGCGCCTGGCAACGGCTGTTGGGCTCGATCGGGCGCAGCGAGTTGTTTCAAGAGGATGGTTCGTTGCTGGTGTTCGAGAAGCCTGAGTCAC < 1:116913/150‑1 CCAGAAGTCCACCGGCACCGCCTGCTGTTGCATGCGTGTGCGCAACGCCTCCAGCGCCTGGCGTGACTCAGGCTTCTCGAACACCAGCAACGAACCATCCTCTTGAAACAACTCGCTGCGCCCGATCGAGCCCAACAGCCGTTGCCAGGCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1433875‑1434028 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcccGGCGCCGTTCCAGCGCAGCGTGGCGGGCATCCGCACGCTGAACGAAGGCAGCCTGGGCGCCTGGCAACGGCTGTTGGGCTCGATCGGGCGCAGCGAGTTGTTTCAAGAGGATGGTTCGTTGCTGGTGTTCGAGAAGCCTGAGTCAC < NC_002947/1434082‑1433937 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |