New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1657857 = | 31 (1.100) | 4 (0.150) | 4/230 | NT | 13.6% | coding (679/1698 nt) | PP_1450 | TPS family activation/secretion protein |
? | NC_002947 | 1657905 = | 22 (0.840) | coding (631/1698 nt) | PP_1450 | TPS family activation/secretion protein |
CCAGTGCCTTCCCAGGCCTGCTTGGGCAGCCACTGTACCTGCCCGACCTTGAGCAAGGCCTGGACCAGCTCAACCGCCTTCGCGCCTATGAACTGGGCGCCACCTTGCTGCCCGGCGAACTGCAGGGCGGCACCCGCGTGGTCGTGCAGCCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1658012‑1657857 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgggcaGCAAGGTGGCGCCCAGTTCATAGGCGCGAAGGCGGTTGAGCTGGTCCAGGCCTTGCTCAAGGTCGGGCAGGTACAGTGGCTGCCCAA > NC_002947/1657905‑1657991 CCAGTGCCTTCCCAGGCCTGCTTGGGCAGCCACTGTACCTGCCCGACCTTGAGCAAGGCCTGGACCAGCTCAACCGCCTTCGCGCCTATGAACTGGGCGCCACCTTGCTGCCCGGCGAACTGCAGGGCGGCACCCGCGTGGTCGTGCAGC > 2:701580/1‑150 CAGTGCCTTCCCAGGCCTGCTTGGGCAGCCACTGTACCTGCCCGACCTTGAGCAAGGCCTGGACCAGCTCAACCGCCTTCGCGCCTATGAACTGGGCGCCACCTTGCTGCCCGGCGAACTGCAGGGCGGCACCCGCGTGGTCGTGCAGCC > 2:266368/1‑150 GTGCCTTCCCAGGCCTGCTTGGGCAGCCACTGTACCTGCCCGACCTTGAGCAAGGCCTGGACCAGCTCAACCGCCTTCGCGCCTATGAACTGGGCGCCACCTTGCTGCCCGGCGAACTGCAGGGCGGCACCCGCGTGGTCGTGCAGCCGG < 1:266368/150‑1 TGCCTTCCCAGGCCTGCTTGGGCAGCCACTGTACCTGCCCGACCTTGAGCAAGGCCTGGACCAGCTCAACCGCCTTCGCGCCTATGAACTGGGCGCCACCTTGCTGCCCGGCGAACTGCAGGGCGGCACCCGCGTGGTCGTGCAGCCGGG > 2:326013/1‑150 TGCCCGGCGAACTGCAGGGCGGCACCCGCGTGGTCGTGCAGCCGGGCAGCAAGGTGGCGCCCAGTTCATAGGCGCGAAGGCGGTTGAGCTG > 1:17703/1‑91 TGCCCGGCGAACTGCAGGGCGGCACCCGCGTGGTCGTGCAGCCGGGCAGCAAGGTGGCGCCCAGTTCATAGGCGCGAAGGCGGTTGAGCTG < 2:17703/91‑1 CCGGCGAACTGCAGGGCGGCACCCGCGTGGTCGTGCAGCCGGGCAGCAAGGTGGCGCCCAGTTCATAGGCGCGAAGGCGGTTGAGCTGGTCCAGGCCTTGCTCAAGGTCGGGCAGGTACAGTGGCTGCCCAA < 1:248974/132‑1 CCGGCGAACTGCAGGGCGGCACCCGCGTGGTCGTGCAGCCGGGCAGCAAGGTGGCGCCCAGTTCATAGGCGCGAAGGCGGTTGAGCTGGTCCAGGCCTTGCTCAAGGTCGGGCAGGTACAGTGGCTGCCCAA > 2:248974/1‑132 CCAGTGCCTTCCCAGGCCTGCTTGGGCAGCCACTGTACCTGCCCGACCTTGAGCAAGGCCTGGACCAGCTCAACCGCCTTCGCGCCTATGAACTGGGCGCCACCTTGCTGCCCGGCGAACTGCAGGGCGGCACCCGCGTGGTCGTGCAGCCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1658012‑1657857 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgggcaGCAAGGTGGCGCCCAGTTCATAGGCGCGAAGGCGGTTGAGCTGGTCCAGGCCTTGCTCAAGGTCGGGCAGGTACAGTGGCTGCCCAA > NC_002947/1657905‑1657991 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |