New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2770084 | 26 (0.920) | 3 (0.110) | 3/234 | NT | 10.0% | coding (94/354 nt) | PP_2422 | hypothetical protein |
? | NC_002947 | = 2770120 | 29 (1.080) | coding (58/354 nt) | PP_2422 | hypothetical protein |
GCCGTCGCAGCGGGTGGTCACAGCCACGGCCAAGGAGATCAGCTCGCGGGTCTTGGCATCCAGGTGGTTGGTCTTGGCACCTGCACCGCTGGCGGTCATGTAGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2769977‑2770084 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcATCGGCGATCTCAAGCAACTCTCCCCCGACACCGTAGCCGGCTACATGACCGCCAGCGGTGCAGGTGCCAAGACCAACCACCTGGATGCCAAGACCCGCGAGC < NC_002947/2770120‑2770018 GCCGTCGCAGCGGGTGGTCACAGCCACGGCCAAGGAGATCAGCTCGCGGGTCTTGGCATCCAGGTGGTTGGTCTTGGCACCTGCACCGCTGGCGGTCATGTAGCCGGCATCGGCGATCTCAAGCAACTCTCCCCCGACACCGTAGCCGGC < 1:121862/150‑1 CGTCGCAGCGGGTGGTCACAGCCACGGCCAAGGAGATCAGCTCGCGGGTCTTGGCATCCAGGTGGTTGGTCTTGGCACCTGCACCGCTGGCGGTCATGTAGCCGGCATCGGCGATCTCAAGCAACTCTCCCCCGACACCGTAGCCGGCTA > 1:445189/1‑150 CGCAGCGGGTGGTCACAGCCACGGCCAAGGAGATCAGCTCGCGGGTCTTGGCATCCAGGTGGTTGGTCTTGGCACCTGCACCGCTGGCGGTCATGTAGCCGGCATCGGCGATCTCAAGCAACTCTCCCCCGACACCGTAGCCGGCTACAT < 2:445189/150‑1 GCCGGCATCGGCGATCTCAAGCAACTCTCCCCCGACACCGTAGCCGGCTACATGACCGCCAGCGGTGCAGGTGCCAAGACCAACCACCTGGATGCCAAGACCCGCGAGC > 1:706757/1‑109 GCCGGCATCGGCGATCTCAAGCAACTCTCCCCCGACACCGTAGCCGGCTACATGACCGCCAGCGGTGCAGGTGCCAAGACCAACCACCTGGATGCCAAGACCCGCGAGC < 2:706757/109‑1 GCCGTCGCAGCGGGTGGTCACAGCCACGGCCAAGGAGATCAGCTCGCGGGTCTTGGCATCCAGGTGGTTGGTCTTGGCACCTGCACCGCTGGCGGTCATGTAGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2769977‑2770084 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcATCGGCGATCTCAAGCAACTCTCCCCCGACACCGTAGCCGGCTACATGACCGCCAGCGGTGCAGGTGCCAAGACCAACCACCTGGATGCCAAGACCCGCGAGC < NC_002947/2770120‑2770018 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |