New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2783220 = | 21 (0.750) | 4 (0.150) | 4/240 | NT | 14.4% | coding (246/927 nt) | PP_2436 | LysR family transcriptional regulator |
? | NC_002947 | 2783251 = | 27 (0.980) | coding (215/927 nt) | PP_2436 | LysR family transcriptional regulator |
TTACCCAGCCGGCAGTGTCCAATGCCCTGTCGCGCCTGCGCGAAACCTTCAATGACCCGCTGTTCGTGCGTACCGCGCAAGGCATGGTGCCCACACCCATGGCGCAGAACATCATCGGCCCTGTGCGCAAC‑GCGCTGGCGCTGTTGCGGACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2783371‑2783220 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acaGGGCCGATGATGTTCTGCGCCATGGGTGTGGGCACCATGCCTTGCGCGGTACGCACGAACAGCGGGTCATTGAAGGTTTCGCGCAGGCGCGACAGGGCATTGGACACTGCCGGCTGGGTAATGCCGACGATCTGCCCGGCGCGGGTCAG > NC_002947/2783251‑2783399 TTACCCAGCCGGCAGTGTCCAATGCCCTGTCGCGCCTGCGCGAAACCTTCAATGACCCGCTGTTCGTGCGTACCGCGCAAGGCATGGTGCCCACACCCATGGCGCAGAACATCATCGGCCCTGTGCGCAAC‑GCGCTGGCGCTGTTGCGGA < 2:419795/150‑1 AATGCCCTGTCGCGCCTGCGCGAAACCTTCAATGACCCGCTGTTCGTGCGTACCGCGCAAGGCATGGTGCCCACACCCATGGCGCAGAACATCATCGGCCCTGTCCGCAACAGCGCCAGCGC‑GTTGCGCACAGGGCCGATGAT < 1:255842/143‑1 AATGCCCTGTCGCGCCTGCGCGAAACCTTCAATGACCCGCTGTTCGTGCGTACCGCGCAAGGCATGGTGCCCACACCCATGGCGCAGAACATCATCGGCCCTGTCCGCAACAGCGCCAGCGC‑GTTGCGCACAGGGCCGATGAT > 2:255842/1‑143 CTGTGCGCAAC‑GCGCTGGCGCTGTTGCGGACAGGGCCGATGATGTTCTGCGCCATGGGTGTGGGCACCATGCCTTGCGCG > 1:732259/1‑80 CTGTGCGCAAC‑GCGCTGGCGCTGTTGCGGACAGGGCCGATGATGTTCTGCGCCATGGGTGTGGGCACCATGCCTTGCGCG < 2:732259/80‑1 AGGGCCGATGATGTTCTGCGCCATGGGTGTGGGCACCATGCCTTGCGCGGTACGCACGAACAGCGGGTCATTGAAGGTTTCGCGCAGGCGCGACAGGGCATTGGACACTGCCGGCTGGGTAATGCCGACGATCTGCCCGGCGCGGGTCAt < 1:144842/150‑2 TTACCCAGCCGGCAGTGTCCAATGCCCTGTCGCGCCTGCGCGAAACCTTCAATGACCCGCTGTTCGTGCGTACCGCGCAAGGCATGGTGCCCACACCCATGGCGCAGAACATCATCGGCCCTGTGCGCAAC‑GCGCTGGCGCTGTTGCGGACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2783371‑2783220 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acaGGGCCGATGATGTTCTGCGCCATGGGTGTGGGCACCATGCCTTGCGCGGTACGCACGAACAGCGGGTCATTGAAGGTTTCGCGCAGGCGCGACAGGGCATTGGACACTGCCGGCTGGGTAATGCCGACGATCTGCCCGGCGCGGGTCAG > NC_002947/2783251‑2783399 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |