New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3749840 = | 23 (0.820) | 3 (0.110) | 3/232 | NT | 13.1% | coding (60/372 nt) | PP_3313 | heat shock protein |
? | NC_002947 | 3749877 = | 18 (0.680) | coding (23/372 nt) | PP_3313 | heat shock protein |
AGTCGTGCGCGGCGAAACTGAAACCCAAACACTGCTGCCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3749882‑3749840 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcgcACGACTGCTTGCTTGTCGTTCATGGTGATTCCTCCTTCAAACCTTTGCTGTTACTGGATGACTATACGCTTGGGCTGCAGCGCTTCCCGCCGCGGCAGGGAAATGCGCAGGACGCCGTCGCGGTAGTGGGCCTCGACCTTGTCGGT > NC_002947/3749877‑3750022 AGTCGTGCGCGGCGAAACTGAAACCCAAACACTGCTGCCGCGCACGACTGCTTGCTTGTCGTTCATGGTGATTCCTCCTTCAAACCTTTGCTGTTACTGGATGACTATACGCTTGGGCTGCAGCGCTTCCCGCCGCGGCAG > 1:70253/1‑141 AGTCGTGCGCGGCGAAACTGAAACCCAAACACTGCTGCCGCGCACGACTGCTTGCTTGTCGTTCATGGTGATTCCTCCTTCAAACCTTTGCTGTTACTGGATGACTATACGCTTGGGCTGCAGCGCTTCCCGCCGCGGCAG < 2:70253/141‑1 CGTGCGCGGCGAAACTGAAACCCAAACACTGCTGCCGCGCACGACTGCTTGCTTGTCGTTCATGGTGATTCCTCCTTCAAACCTTTGCTGTTACTGGATGACTATACGCTTGGGCTGCAGCGCTTCCCGCCGCGGCAGGGAAATGCGCAG > 2:337817/1‑150 GCGCACGACTGCTTGCTTGTCGTTCATGGTGATTCCTCCTTCAAACCTTTGCTGTTACTGGATGACTATACGCTTGGGCTGCAGCGCTTCCCGCCGCGGCAGGGAAATGCGCAGGACGCCGTCGCGGTAGTGGGCCTCGACCTTGTCGGT > 1:238559/1‑150 AGTCGTGCGCGGCGAAACTGAAACCCAAACACTGCTGCCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3749882‑3749840 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcgcACGACTGCTTGCTTGTCGTTCATGGTGATTCCTCCTTCAAACCTTTGCTGTTACTGGATGACTATACGCTTGGGCTGCAGCGCTTCCCGCCGCGGCAGGGAAATGCGCAGGACGCCGTCGCGGTAGTGGGCCTCGACCTTGTCGGT > NC_002947/3749877‑3750022 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |