New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3749840 = | 23 (0.820) | 3 (0.110) | 3/232 | NT | 13.1% | coding (60/372 nt) | PP_3313 | heat shock protein |
? | NC_002947 | 3749877 = | 18 (0.680) | coding (23/372 nt) | PP_3313 | heat shock protein |
GCCTCCAGCTGTTCGGACAACTGCGGCATGATCTCCCCTTCCAGCACCAGCGTGTCACCCTCCACATTGACCACGAGATGATCCTTGGGCCCCCCGGGAAAGTCGGCAAACAGCTGGATTCCGTTTTCGTCTTCGAAGACATCGACGCGCGGCAGCAGTGTTTGGGTTTCAGTTTCGCCGCGCACGACTGCTTGCTTGTCGTTCATGGTGATTCCTCCTTCAAACCTTTGCTGTTACTGGATGACTATACGCTTGGGCTGCAGCGCTTCCCGCCGCGGCAGGGAAATGCGCA > NC_002947/3749694‑3749985 | accgacaaggtcgaggcccactaccgcgacggcgtcctgcgcatttccctgccgcggcgggaagcgctgcagcccaagcgtatagtcatccagtaacagcaaaggtttgaaggaggaatcaccatgaacgacaagcaagcagtcgtgcgc > 1:238559‑M1/147‑150 (MQ=255) cAGCTGTTCGGACAACTGCGGCATGATCTCCCCTTCCAGCACCAGCGTGTCACCCTCCACATTGACCACGAGATGATCCTTGGGCCCCCCGGGAAAGTCGGCAAACAGCTGGATTCCGTTTTCGTCTTCGAAGACATCGACGCGCGgcag < 1:243363/150‑1 (MQ=255) gCTGTTCGGACAACTGCGGCATGATCTCCCCTTCCAGCACCAGCGTGTCACCATCCACATTGACCACGAGATGATCCTTGGGCCCCCCGGGAAAGTCGGCAAACAGCTGGATTCCGTTTTCGTCTTCGAAGACATCGACGCGCGgcagca < 2:250785/150‑1 (MQ=255) gACAACTGCGGCATGATCTCCCCTTCCAGCACCAGCGTGTCACCCTCCACATTGACCACGAGATGATCCTTGGGCCCCCCGGGAAAGTCGGCAAACAGCTGGATTCCGTTTTCGTCTTCGAAGACATCGACGCGCGGCAGCAGTGTTTgg < 1:557073/150‑1 (MQ=255) ccgCGGCATGATCTCCCCGTCCAGCACCAGCGTGTCACCCTCCACAGTGACCACGAGATGTTCCTTGGGCCCCCCGGGAAAGTCGGCAAACAGCTGGATTCCGTTTTCGTCTTCGAAGACATCGACGCGCGGCAGCAGTGTTTGGGTTTc < 1:312711/148‑1 (MQ=255) gCATGATCTCCCCTTCCAGCACCAGCGTGTCACCCTCCACATTGACCACGAGATGATCCTTGGGCCCCCCGGGAAAGTCGGCAAACAGCTGGATTCCGTTTTCGTCTTCGAAGACATCGACGCGCGGCAGCAGTGTTTg > 1:525401/1‑139 (MQ=255) gCATGATCTCCCCTTCCAGCACCAGCGTGTCACCCTCCACATTGACCACGAGATGATCCTTGGGCCCCCCGGGAAAGTCGGCAAACAGCTGGATTCCGTTTTCGTCTTCGAAGACATCGACGCGCGGCAGCAGTGTTTg < 2:525401/139‑1 (MQ=255) gATCTCCCCTTCCAGCACCAGCGTGTCACCCTCCACATTGACCACGAGATGATCCTTGGGCCCCCCGGGAAAGTCGGCAAACAGCTGGATTCCGTTTTCGTCTTCGAAGACATCGACGCGCGGCAGCAGTGTTTGGGTTTCAGTTTcgcc > 1:216341/1‑150 (MQ=255) tcCCCTTCCAGCACCAGCGTGTCACCCTCCACATTGACCACGAGATGATCCTTGGGCCCCCCGGGAAAGTCGGCCAACAGCTGGATTCCGTTTTCGTCTTCGAAGACATCGACGCGCGGCACCAGTGTTTGGGTTTCAGTTTCGCCgcgc > 2:251560/1‑150 (MQ=255) cccTTCCAGCACCAGCGTGTCACCCTCCACATTGACCACGAGATGATGCTTGGGCCCCCCGGGAAAGTCGGCAAACAGCTGGATTCCGTTTTCGTCTTCGAAGACATCGACGCGCGGCAGCAGTGTTTGGGTTTCAGTTTCGCCGCGCAc > 1:548528/1‑150 (MQ=255) ctgcgcatttccctgccgcggcgggaagcgctgcagcccaagcgtatagtcatccagtaacagcaaaggtttgaaggaggaatcaccatgaacgacaagcaagcagtcgtGCGCGGCAGCAGTGTTTGGGTTTCAGTTTCGCCGCGCACg > 2:337817‑M1/111‑150 (MQ=255) aGCACCAGCGTGTCACCCTCCACATTGACCACGAGATGATCCTTGGGCCCCCCGGGAAAGTCGGCAAACAGCTGGATTCCGTTTTCGTCTTCGAAGACATCGACGCGCGGCAGCAGTGTTTGGGTTTCAGTTTCGCCGCGCACGACtgct > 2:37029/1‑150 (MQ=255) ctgccgcggcgggaagcgctgcagcccaagcgtatagtcatccagtaacagcaaaggtttgaaggaggaatcaccatgaacgacaagcaagcagtcgtGCGCGGCAGCAGTGTTTGGGTTTCAGTTTCGCCGCGCACGACt < 2:70253‑M1/43‑1 (MQ=255) ctgccgcggcgggaagcgctgcagcccaagcgtatagtcatccagtaacagcaaaggtttgaaggaggaatcaccatgaacgacaagcaagcagtcgtGCGCGGCAGCAGTGTTTGGGTTTCAGTTTCGCCGCGCACGACt > 1:70253‑M1/99‑141 (MQ=255) gCGTGTCACCCTCCACATTGACCACGAGATGATCCTTGGGCCCCCCGGGAAAGTCGGCAAACAGCTGGATTCCGTTTTCGTCTTCGAAGACATCGACGCGCGGCAGCAGTGTTTGGGTTTCAGTTTCGCCGCGCACGACTGCTTGCTTGt > 1:17984/1‑150 (MQ=255) tCCACATTGACCACGAGATGATCCTTGGGCCCCCCGGGAAAGTCGGCAAACAGCTGGATTCCGTTTTCGTCTTCGAAGACATCGACGCGCGGCAGCAGTGTTTgg > 2:660544/1‑105 (MQ=255) tCCACATTGACCACGAGATGATCCTTGGGCCCCCCGGGAAAGTCGGCAAACAGCTGGATTCCGTTTTCGTCTTCGAAGACATCGACGCGCGGCAGCAGTGTTTgg < 1:660544/105‑1 (MQ=255) gACCACGAGATGATCCTTGGGCCCCCCGGGAAAGTCGGCAAACAGCTGGATTCCGTTTTCGTCTTCGAAGACATCGACGCGCGGCAGCAGTGTTTGGGTTTCAGTTTCGCCGCGCACGACTGCTTGCTTGTCGTTCATGGTGATtcctcc < 1:37029/150‑1 (MQ=255) aCGAGATGATCCTTGGGCCCCCCGGGAAAGTCGGCAAACAGCTGGATTCCGTTTTCGTCTTCGAAGACATCGACGCGCGGCAGCAGTGTTTGGGTTTCAGTTTCGCCGCGCACGACTGCTTGCTTGTCGTTCATGGTGATTCCTCCTTCa > 2:745132/1‑150 (MQ=255) gatCCTTGGGCCCCCCGGGAAAGTCGGCAAACAGCTGGATTCCGTTTTCGTCTTCGAAGACATCGACGCGCGGCAGCAGTGTTTGGGTTTCAGTTTCGCCGCGCACGACTGCTTGCTTGTCGTTCATGGTGATTCCTCCTTCACACCttt > 2:207198/1‑150 (MQ=255) ccccccGGGAAAGTCGGCAAACAGCTGGATTCCGTTTTCGTCTTCGAAGACATCGACGCGCGGCAGCAGTGTTTGGGTTTCAGTTTCGCCGCGCACGACTGCTTGCTTGTCGTTCATGGTGATTCCTCCTTCAAACCTTTGCTGTTACTg < 2:216341/150‑1 (MQ=255) gCAAACAGCTGGATTCCGTTTTCGTCTTCGAAGACATCGACGCGCGGCAGCAGTGTTTGGGTTTCAGTTTCGCCGCGCACGACTGCTTGCTTGTCGTTCATGGTGATTCCTCCTTCAAACCTTTGCTGTTACTGGAt > 1:79476/1‑137 (MQ=255) gCAAACAGCTGGATTCCGTTTTCGTCTTCGAAGACATCGACGCGCGGCAGCAGTGTTTGGGTTTCAGTTTCGCCGCGCACGACTGCTTGCTTGTCGTTCATGGTGATTCCTCCTTCAAACCTTTGCTGTTACTGGAt < 2:79476/137‑1 (MQ=255) tGGATTCCGTTTTCGTCTTCGAAGACATCGACGCGCGGCAGCAGTGTTTGGGTTTCAGTTTCGCCGCGCACGACTGCTTGCTTGTCGTTCATGGTGATTCCTCCTTCAAACCTTTGCTGTTACTGGATGACTATACGCTTGGGCTGCAgc < 2:548528/150‑1 (MQ=255) ttCCGTTTTCGTCTTCGAAGACATCGACGCGCGGCAGCAGTGTTTGGGTTTCAGTTTCGCCGCGCACGACTGCTTGCTTGTCGTTCATGGTGATTCCTCCTTCAAACCTTTGCTGTTACTGGATGACTATACGCTTGGGCTGCAGCGCtt > 2:452201/1‑150 (MQ=255) tCGTCTTCGAAGACATCGACGCGCGGCAGCAGTGTTTGGGTTTCAGTTTCGCCGCGCACGACTGCTTGCTTGTCGTTCATGGTGATTCCTCCTTCAAACCTTTGCTGTTACTGGATGACTATACGCTTGGGCTGCAGCGCTTCCcgccgc < 1:745132/150‑1 (MQ=255) aTCGACGCGCAGCAGCAGTGTTTGGGTTTCAGTTTCGCCGCGCACGACTGCTTGCTTGTCGTTCATGGTGATTCCTCCTTCAAACCTTTGCTGTTACTGGATGACTATACGCTTGGGCTGCAGCGCTTCCCGCCGCGGCAGGGAAATgcg > 2:627458/1‑150 (MQ=255) cGACGCGCGGCAGCAGTGTTTGGGTTTCAGTTTCGCCGCGCACGACTGCTTGCTTGTCGTTCATGGTGATTCCTCCTTCAAACCTTTGCTGTTACTGGATGACTATACGCTTGGGCTGCAGCGCTTCCCGCCGCGGCAGGGAAATGCGCa < 2:17984/150‑1 (MQ=255) | GCCTCCAGCTGTTCGGACAACTGCGGCATGATCTCCCCTTCCAGCACCAGCGTGTCACCCTCCACATTGACCACGAGATGATCCTTGGGCCCCCCGGGAAAGTCGGCAAACAGCTGGATTCCGTTTTCGTCTTCGAAGACATCGACGCGCGGCAGCAGTGTTTGGGTTTCAGTTTCGCCGCGCACGACTGCTTGCTTGTCGTTCATGGTGATTCCTCCTTCAAACCTTTGCTGTTACTGGATGACTATACGCTTGGGCTGCAGCGCTTCCCGCCGCGGCAGGGAAATGCGCA > NC_002947/3749694‑3749985 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |