New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3978404 | 26 (0.920) | 3 (0.110) | 3/236 | NT | 9.2% | coding (2271/3762 nt) | cobN | aerobic cobaltochelatase subunit CobN |
? | NC_002947 | = 3978429 | 34 (1.260) | coding (2246/3762 nt) | cobN | aerobic cobaltochelatase subunit CobN |
GGTCGGGTAACTGTGCCGTGCCCTCCAATGCCTGCCCGATCACCTGCAGTGCCAGCAGCTCAAGGCGCTCGCGGGTGTCGCCACAGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3978286‑3978404 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcCGTGGCAGGGCATACGCCCTGAACAGCTGCA < NC_002947/3978429‑3978399 GGTCGGGTAACTGTGCCGTGCCCTCCAATGCCTGCCCGATCACCTGCAGTGCCAGCAGCTCAAGGCGCTCGCGGGTGTCGCCACAGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCCGTGGCAGGGCATACGCCCTGAACAGCTGCA < 2:275199/150‑1 CCACAGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCCGTGGCAGGGCATACGCCCTGAACAGCT < 1:546540/67‑1 CCACAGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCCGTGGCAGGGCATACGCCCTGAACAGCT > 2:546540/1‑67 GGTCGGGTAACTGTGCCGTGCCCTCCAATGCCTGCCCGATCACCTGCAGTGCCAGCAGCTCAAGGCGCTCGCGGGTGTCGCCACAGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3978286‑3978404 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcCGTGGCAGGGCATACGCCCTGAACAGCTGCA < NC_002947/3978429‑3978399 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |