New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5078805 =	34 (1.210)	3 (0.110)	3/238	NT	8.6%	intergenic (‑2/+395)	mgtE/PP_t56	magnesium transporter/tRNA‑Arg
	?	NC_002947	5078837 =	31 (1.140)					intergenic (‑34/+363)	mgtE/PP_t56	magnesium transporter/tRNA‑Arg

CCCTCGGCGTGCTCCGCTGCTGGGAGTGGAGTTCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5078841‑5078805 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATAC  >  NC_002947/5078837‑5078949                                                                                                                                                        CCCTCGGCGTGCTCCGCTGCTGGGAGTGGAGTTCGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATAC  >  1:723047/1‑150  CCTCGGCGTGCTCCGCTGCTGGGAGTGGAGTTCGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGG                      <  1:194394/129‑1  CCTCGGCGTGCTCCGCTGCTGGGAGTGGAGTTCGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGG                      >  2:194394/1‑129                                                                                                                                                        CCCTCGGCGTGCTCCGCTGCTGGGAGTGGAGTTCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5078841‑5078805 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATAC  >  NC_002947/5078837‑5078949

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.