New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5636524 = | 25 (0.890) | 3 (0.110) | 3/234 | NT | 10.8% | coding (841/1803 nt) | PP_4948 | acyl‑CoA dehydrogenase family protein |
? | NC_002947 | 5636548 = | 26 (0.970) | coding (865/1803 nt) | PP_4948 | acyl‑CoA dehydrogenase family protein |
TTGTCCGGCAGTCGGCCCTGCGGCCGCTGGCGAGCGTATTCCAGGGAGTAAAGGTAGCCGGCGTAACCCAGCATCACCGCGCCCATGCCTACGCCTATCCGCGCCTCGTTCATCATCTGGAACATGCAGGCCAGGCCCTGGTGCGGCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5636675‑5636524 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccTGCATGTTCCAGATGATGAACGAGGCGCGGATAGGCGTAGGCATGGGCGCGGTGATGCTGGGTTACGCCGGCTACCTTTACTCCCTGGAAT > NC_002947/5636548‑5636638 TTGTCCGGCAGTCGGCCCTGCGGCCGCTGGCGAGCGTATTCCAGGGAGTAAAGGTAGCCGGCGTAACCCAGCATCACCGCGCCCATGCCTACGCCTATCCGCGCCTCGTTCATCATCTGGAACATGCAGGCCAGGCCCTGGTGCGGCTGG < 2:421724/150‑1 GCTGGCGAGCGTATTCCAGGGAGTAAAGGTAGCCGGCGTAACCCAGCATCACCGCGCCCATGCCTACGCCTATCCGCGCCTCGTTCATCATCTGGAACATGCAGGCCAGCCGCACCAGGGCCTGGCCTGCATGTTCCAGATGATGAACGA < 1:585991/150‑1 AGGGAGTAAAGGTAGCCGGCGTAACCCAGCATCACCGCGCCCATGCCTACGCCTATCCGCGCCTCGTTCATCATCTGGAACATGCAGGCCAGGCCCTGGTGCGGCTGG > 1:518759/1‑108 AGGGAGTAAAGGTAGCCGGCGTAACCCAGCATCACCGCGCCCATGCCTACGCCTATCCGCGCCTCGTTCATCATCTGGAACATGCAGGCCAGGCCCTGGTGCGGCTGG < 2:518759/108‑1 TCTGGAACATGCAGGCCAGGCCCTGGTGCGGCTGGCCTGCATGTTCCAGATGATGAACGAGGCGCGGATAGGCGTAGGCATGGGCGCGGTGATGCTGGGTTACGCCGGCTACCTTTACTCCCTGGAAT > 1:673649/1‑128 TCTGGAACATGCAGGCCAGGCCCTGGTGCGGCTGGCCTGCATGTTCCAGATGATGAACGAGGCGCGGATAGGCGTAGGCATGGGCGCGGTGATGCTGGGTTACGCCGGCTACCTTTACTCCCTGGAAT < 2:673649/128‑1 TTGTCCGGCAGTCGGCCCTGCGGCCGCTGGCGAGCGTATTCCAGGGAGTAAAGGTAGCCGGCGTAACCCAGCATCACCGCGCCCATGCCTACGCCTATCCGCGCCTCGTTCATCATCTGGAACATGCAGGCCAGGCCCTGGTGCGGCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5636675‑5636524 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccTGCATGTTCCAGATGATGAACGAGGCGCGGATAGGCGTAGGCATGGGCGCGGTGATGCTGGGTTACGCCGGCTACCTTTACTCCCTGGAAT > NC_002947/5636548‑5636638 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |