New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5636524 = | 25 (0.890) | 3 (0.110) | 3/234 | NT | 10.8% | coding (841/1803 nt) | PP_4948 | acyl‑CoA dehydrogenase family protein |
? | NC_002947 | 5636548 = | 26 (0.970) | coding (865/1803 nt) | PP_4948 | acyl‑CoA dehydrogenase family protein |
GCCCAAGTACCACGTAAACCCGAACGGCAGCCGTGGCCCGCGCAACGATGTGCTGCTGGCCGGGCTGTTCCACAAGATGGGCTGGCGTGGCACCACCTCGACCGCGCTGAACTTCGGCGACAATGGCCAGTGCGTCGGGTACCTGGTCGGCCAGCCGCACCAGGGCCTGGCCTGCATGTTCCAGATGATGAACGAGGCGCGGATAGGCGTAGGCATGGGCGCGGTGATGCTGGGTTACGCCGGCTACCTTTACTCCCTGGAATACGCTCGCCAGC > NC_002947/5636376‑5636650 | gCCCAAGTACCACGTAAACCCGAACGGCAGCCGTGGCCCGCGCAACGATGTGCTGCTGGCCGGGCTGTTCCACAAGATGGGCTGGCGTGGCACCACCTCGACCGCGCTGAACTTCGGCGACACTGGCCAGTGCGTCGGGTACCTGGTCgg > 2:91170/1‑150 (MQ=255) ccAAGTACCACGTAAACCCGAACGGCAGCCGTGGCCCGCGCAACGATGTGCTGCTGGCCGGGCTGTTCCACAAGATGGGCTGGCGTGGCACCACCTCGACCGCGCTGAACTTCGGCGACAATGGCCAGTGCGTCGGGTACCTGGTCGGcc > 1:514528/1‑150 (MQ=255) aaGTACCACGTAAACCCGAACGGCAGCCGTGGCCCGCGCAACGATGTGCTGCTGGCCGGGCTGTTCCACAAGATGGGCTGGCGTGGCACCACCTCGACCGCGCTGAACTTCGGCGACAATGGCCAGTGCGTCGGGTACCTGGTCGGCCAg > 2:128820/1‑150 (MQ=255) aaGTACCACGTAAACCCGAACGGCAGCCGTGGCCCGCGCAACGATGTGCTGCTGGCCGGGCTGTTCCACAAGATGGGCTGGCGTGGCACCACCTCGACCGCGCTGAACTTCGGCGACAATGGCCAGTGCGTCGGGTACCTGGTCGGCCAg > 1:42089/1‑150 (MQ=255) cGTAAACCCGAACGGCAGCCGTGGCCCGCGCAACGTTGTGCTGCTGGCCGGGCTGTTCCACAAGATGGGCTGGCGTGGCACCACCTCGACCGCGCTGAACTTCGGCGACAATGGCCAGTGCGTCGGGTACCTGGTCGGCCAGCCGCACCa > 2:322627/1‑150 (MQ=255) cGAACGGCAGCCGTGGCCCGCGCAACGATGTGCTGCTGGCCGGGCTGTTCCACAAGATGGGCTGGCGTGGCACCACCTCGACCGCGCTGAACTTCGGCGACAATGGCCAGTGCGTCGGGTACCTGGTCGGCCAGCCGCACCAGggcctgg > 1:639413/1‑150 (MQ=255) gCCGTGGCCCGCGCAACGATGTGCTGCTGGCCGGGCTGTTCCACAAGATGGGCTGGCGTGGCACCACCTCGACCGCGCTGAACTTCGGCGACAATGGCCAGTGCGTCGGGTACCTGGTCGGCCAGCCGCACCAGGGCCTGGCCTGCATGt > 2:665580/1‑150 (MQ=255) cgcgCAACGATGTGCTGCTGGCCGGGCTGTTCCACAAGATGGGCTGGCGTGGCACCACCTCGACCGCGCTGAACTTCGGCGACAATGGCCAGTGCGTCGGGTACCTGGTCGGCCAGCCGCACCAGGGCCTGGCCTGCATGTTCCAgatga < 1:128820/150‑1 (MQ=255) cGATGTGCTGCTGGCCGGGCTGTTCCACAAGATGGGCTGGCGTGGCACCACCGCGACCGCGCTGAACTTCGGCGACAATGGCCAGTGCGTCGGGTACCTCGTCGGTCAGCCGCACCAGGGCCTGGCCTGCATGTTCCAGATGATGAACGa < 2:293350/150‑1 (MQ=255) gATGTGCTGCTGGCCGGGCTGTTCCACAAGATGGGCTGGCGTGGCACCACCTCGACCGCGCTGAACTTCGGCGACAATGGCCAGTGCGTCGGGTACCTGGTCGGCCAGCCGCACCAGGGCCTGGCCTGCATGTTCCAGATGATGAACGAg < 2:82049/150‑1 (MQ=255) gATGTGCTGCTGGCCGGGCTGTTCCACAAGATGGGCTGGCGTGGCACCACCTCGACCGCGCTGAACTTCGGCGACAATGGCCAGTGCGTCGGGTACCTGGTCGGCCAGCCGCACCAGGGCCTGGCCTGCATGTTCCAGATGATGAACGAg < 1:28957/150‑1 (MQ=255) gATGTGCTGCTGGCCGGGCTGTTCCACAAGATGGGCTGGCGTGGCACCACCTCGACCGCGCTGAACTTCGGCGACAATGGCCAGTGCGTCGGGTACCTGGTCGGCCAGCCGCACCAGGGCCTGGCCTGCATGTTCCAGATGATGAACGAg > 1:257857/1‑150 (MQ=255) aTGTGCTGCTGGCCGGGCTGTTCCACAAGATGGGCTGGCGTGGCACCACCTCGACCGCGCTGAACTTCGGCGACAATGGCCAGTGCGTCGGGTACCTGGTCGGCCAGCCGCACCAGGGCCTCGCCTGCATGTTCCAGATGATGAACGAgg < 1:665580/150‑1 (MQ=255) attccagggagtaaaggtagccggcgtaacccagcatcaccgcgcccatgcctacgcctatccgcgcctcgttcatcatctggaacatgcaGGCCAGCCGCACCAGGGCCTGGCCTGCATGTTCCAga < 2:673649‑M1/37‑1 (MQ=255) attccagggagtaaaggtagccggcgtaacccagcatcaccgcgcccatgcctacgcctatccgcgcctcgttcatcatctggaacatgcaGGCCAGCCGCACCAGGGCCTGGCCTGCATGTTCCAga > 1:673649‑M1/92‑128 (MQ=255) gCCGGGCTGTTCCACAAGATGGGCTGGCGTGGCACCACCTCGACCGCGCTGAACTTCGGCGACAATGGCCAGTGCGTCGGGTACCTGGTCGGCCAGCCGCACCAGGGCCTGGCCTGCATGTTCCAGATGATGAACGAGGCGCGGATAGGc < 1:221521/150‑1 (MQ=255) ggCTGTTCCACAAGATGGGCTGGCGTGGCACCACCTCGACCGCGCTGAACTTCGGCGACAATGGCCAGTGCGTCCGGCACCTGGTCGGCCATCCGCACCAGGGCCTGGCCTGCATGTTCCAGATGATGAACGAGGCGCGGATAGGCGTAg < 1:91170/150‑1 (MQ=255) tCCACAAGATGGGCTGGCGTGGCACCACCTCGACCGCGCTGAACTTCGGCGACAATGGCCAGTGCGTCGGGTACCTGGTCGGCCAGCCGCACCAGGGCCTGGCCTGCATGTTCCAGATGATGAACGAGGCGCGGATAGGCGTAGGCATgg < 2:639413/150‑1 (MQ=255) acaAGATGGGCTGGCGTGGCACCACCTCGACCGCGCTGAACTTCGGCGACAATGGCCAGTGCGTCGGGTACCTGGTCGGCCAGCCGCACCAGGGCCTGGCCTGCATGTTCCAgatgat > 1:701390/1‑118 (MQ=255) acaAGATGGGCTGGCGTGGCACCACCTCGACCGCGCTGAACTTCGGCGACAATGGCCAGTGCGTCGGGTACCTGGTCGGCCAGCCGCACCAGGGCCTGGCCTGCATGTTCCAgatgat < 2:701390/118‑1 (MQ=255) gggCTGGCGTGGCACCACCTCGACCGCGCTGAACTTCGGCGACAATGGCCAGTGCGTCGGGTACCTGGTCGGCCAGCCGCACCAGGGCCTGGCCTGCATGTTCCAGATGATGAACGAGGCGCGGATAGGCGTAGGCATGGGCGCGGTGAt < 1:322627/150‑1 (MQ=255) gCTGGCGTGGCACCACCTCGACCGCGCTGAACTTCGGCGACAATGGCCAGTGCGTCGGGTACCTGGTCGGCCAGCCGCACCAGGGCCTGGCCTGCATGTTCCa > 2:54246/1‑103 (MQ=255) gCTGGCGTGGCACCACCTCGACCGCGCTGAACTTCGGCGACAATGGCCAGTGCGTCGGGTACCTGGTCGGCCAGCCGCACCAGGGCCTGGCCTGCATGTTCCa < 1:54246/103‑1 (MQ=255) cgggCGTGCCACCACCTCGACCGCGCTGAACGTCGGCGACAATGGCCAGTGCGTCGGGTACCTGGTCGGCCAGCCGCACCAGGGTCTGCCCTGCATGGTCCAGATGATGAACGAGGCGCGGATAGGCGTAGGCATGGGCGCCGTGATGCt < 2:90363/148‑1 (MQ=255) tGGCACCACCTCGACCGCGCTGAACTTCGGCGACAATGGCCAGTGCGTCGGGTACCTGGTCGGCCAGCCGCACCAGGGCCTGGCCTGCATGTTCCAGATGATGAACGAGGCGCGGATAGGCGTAGGCATGGGCGCGGTGATGCTGGGTTa < 2:257857/150‑1 (MQ=255) accTCGACCGCGCTGAACTTCGGCGACAATGGCCAGTGCGTCGGGTACCTGGTCGGCCAGCCGCACCAGGGCCTGGCCTGCATGTTCCAGATGATGAACGAGGCGCGGATAGGCGTAGGCACGGGCGCGGTGATGCTGGGTTACGCCGGc < 2:42089/150‑1 (MQ=255) ccTCGACCGCGCTGAACTTCGGCGACAATGGCCAGTGCGTCGGGTACCTGGTCGGCCAGCCGCACCAGGGCCTGGCCTGCATGTTCCAgatga > 2:370413/1‑93 (MQ=255) ccTCGACCGCGCTGAACTTCGGCGACAATGGCCAGTGCGTCGGGTACCTGGTCGGCCAGCCGCACCAGGGCCTGGCCTGCATGTTCCAgatga < 1:370413/93‑1 (MQ=255) gAACTTCGGCGACAATGGCCAGTGCGTCGGGTACCTGGTCGGCCAGCCGCACCAGGGCCTGGCCTGCATGTTCCAGATGATGAACGAGGCGCGGATAGGCGTAGGCATGGGCGCGGTGATGCTGGGTTACGCCGGCTACCTTTACTCCCt < 2:514528/150‑1 (MQ=255) tcgttcatcatctggaacatgcaGGCCAGGCCCTGGTGCGGCTGGCCTGCATGTTCCAGATGATGAACGAGGCGCGGATAGGCGTAGGCATGGGCGCGGTGATGCTGGGTTACGCCGGCTACCTTTACTCCCTGGAATACGCTCGCCAGc < 1:585991‑M1/127‑1 (MQ=255) | GCCCAAGTACCACGTAAACCCGAACGGCAGCCGTGGCCCGCGCAACGATGTGCTGCTGGCCGGGCTGTTCCACAAGATGGGCTGGCGTGGCACCACCTCGACCGCGCTGAACTTCGGCGACAATGGCCAGTGCGTCGGGTACCTGGTCGGCCAGCCGCACCAGGGCCTGGCCTGCATGTTCCAGATGATGAACGAGGCGCGGATAGGCGTAGGCATGGGCGCGGTGATGCTGGGTTACGCCGGCTACCTTTACTCCCTGGAATACGCTCGCCAGC > NC_002947/5636376‑5636650 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |