New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5995262 = | 45 (1.600) | 4 (0.150) | 4/238 | NT | 8.6% | coding (1826/1983 nt) | PP_5252 | hypothetical protein |
? | NC_002947 | 5995293 = | 41 (1.500) | coding (1795/1983 nt) | PP_5252 | hypothetical protein |
ATGAAGAGGCGATCAAGGGCATCGAGTCGGTGCTGACCATCGTTGATGGCAAGGTGGTGTACGGTGCTGGCGAGTTCGACAAGTTTGGCCCACCGCAGGTGCCGGTGCTGCCGGAGTGGTCGCCGGTGACCAAGGTGCC‑TGGGCACTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5995412‑5995262 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgACCACTCCGGCAGCACCGGCACCTGCGGTGGGCCAAACTTGTCGAACTCGCCAGCACCGTACACCACCTTGCCATCAACGATGGTCAGCACCGACTCGATGCCCTTGATCGCCTCTTCATCGACACTGAAGAAGTCCAGCGACAATGCT > NC_002947/5995293‑5995441 gTGAAGAGGCGATCAAGGGCATCGAGTCGGTGCCGACCATCGTTGATGGCAAGGTGGTGTACGGTGCTGGCGAGTTCGACAAGTTTGGCCCACCGCAGGTGCCGGTGCTGCCGGAGTGGTCGCCGGTGACCAAGGTGCC‑TGGGCACTGGC < 2:195029/149‑1 TCGTTGATGGCAAGGTGGTGTACGGTGCTGGCGAGTTCGACAAGTTTGGCCCACCGCAGGTGCCGGTGCTGCCGGAGTGGTCGCCAGTGCCC‑AGGCACCTTGGTCACCGGCGACCACTCCGGC < 1:278698/123‑1 TCGTTGATGGCAAGGTGGTGTACGGTGCTGGCGAGTTCGACAAGTTTGGCCCACCGCAGGTGCCGGTGCTGCCGGAGTGGTCGCCAGTG‑CCCAGGCACCTTGGTCACCGGCGACCACTCCGGC > 2:278698/1‑123 GTGGTCGCCGGTGACCAAGGTGCC‑TGGGCACTGGCGACCACTCCGGCAGCACCGGCACCTGCGGTGGGCCAAACTTGTCGAACTCGCCAGCACCGTACACCACCTTGCCATCAACGATGGTCAGCACCGACTCGATGCCCTTGATCGCCT > 1:260680/1‑150 TGGTCGCCGGTGACCAAGGTGCC‑TGGGCACTGGCGACCACTCCGGCAGCACCGGCACCTGCGGTGGGCCAAACTTGTCGAACTCGCCAGCACCGTACACCACCTTGCCATCAACGATGGTCAGCACCGACTCGATGCCCTTGATCGCCTC < 2:260680/150‑1 GACCACTCCGGCAGCACCGGCACCTGCGGTGGGCCAAACTTGTCGAACTCGCCAGCACCGTACACCACCTTGCCATCAACGATGGTCAGCACCGACTCGATGCCCTTGATCGCCTCTTCATCGACACTGAAGAAGTCCAGCGACAATGCT < 1:250118/150‑1 GACCACTCCGGCAGCACCGGCACCTGCGGTGGGCCAAACTTGTCGAACTCGCCAGCACCGTACACCACCTTGCCATCAACGATGGTCAGCACCGACTCGATGCCCTTGATCGCCTCTTCATC > 1:549336/1‑122 GACCACTCCGGCAGCACCGGCACCTGCGGTGGGCCAAACTTGTCGAACTCGCCAGCACCGTACACCACCTTGCCATCAACGATGGTCAGCACCGACTCGATGCCCTTGATCGCCTCTTCATC < 2:549336/122‑1 ATGAAGAGGCGATCAAGGGCATCGAGTCGGTGCTGACCATCGTTGATGGCAAGGTGGTGTACGGTGCTGGCGAGTTCGACAAGTTTGGCCCACCGCAGGTGCCGGTGCTGCCGGAGTGGTCGCCGGTGACCAAGGTGCC‑TGGGCACTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5995412‑5995262 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgACCACTCCGGCAGCACCGGCACCTGCGGTGGGCCAAACTTGTCGAACTCGCCAGCACCGTACACCACCTTGCCATCAACGATGGTCAGCACCGACTCGATGCCCTTGATCGCCTCTTCATCGACACTGAAGAAGTCCAGCGACAATGCT > NC_002947/5995293‑5995441 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |