New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3588140 = | 37 (1.310) | 3 (0.130) | 3/206 | NT | 10.3% | intergenic (+18/‑57) | catA‑II/benE‑II | catechol 1,2‑dioxygenase/benzoate transport protein |
? | NC_002947 | 3588208 = | 21 (0.890) | coding (12/1272 nt) | benE‑II | benzoate transport protein |
CCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTT‑GTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCACGACGATCTCCTACGCCGGCCCGTTGGTGA > NC_002947/3588065‑3588356 | ccAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTT‑GTTGGAGCGGGCATGCCCGCGAAGCAGCCa > 1:71178/1‑150 (MQ=255) ggCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGTCATGCCCTTTCCCACATGTGAAGCCTGTGCAGTCTTT‑GTTGGATCGGGCATGCCTGCGAAGCAGTCAacac < 2:278817/150‑1 (MQ=255) aTGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTT‑GTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAaga < 2:629392/150‑1 (MQ=255) gcgcagcgGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTT‑GTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGcc > 2:20767/1‑150 (MQ=255) cgcagcgGGCGGCCGCGAGCTTTGCAGGAGGCCTGATACCCCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTT‑GTTGGCGCGCGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCca < 1:548654/150‑1 (MQ=255) gcgggcggCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGCCGCCTGTGGAGTCGTTAGCCGGTG‑GTGCATAGCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACaaa < 1:203794/150‑1 (MQ=255) cgggcggCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTT‑GTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAg < 1:225933/150‑1 (MQ=255) gAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTT‑GTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCACCAGCATAGATCGGCCGCTg > 2:511911/1‑150 (MQ=255) tGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTT‑GTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCt < 2:732570/147‑1 (MQ=255) tGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTT‑GTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCt > 1:732570/1‑147 (MQ=255) gATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTT‑GTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCAt < 1:214913/150‑1 (MQ=255) cACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTT‑GTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGc > 1:678176/1‑134 (MQ=255) cACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTT‑GTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGc < 2:678176/134‑1 (MQ=255) tGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTT‑GTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGa < 2:71178/150‑1 (MQ=255) cTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTT‑GTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCaa < 1:20767/150‑1 (MQ=255) tttCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTT‑GTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGa > 2:315456/1‑150 (MQ=255) tttCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTT‑GTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGa > 2:367937/1‑150 (MQ=255) GGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTT‑GTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGctct > 1:367937‑M1/1‑150 (MQ=255) gcatgcccgctccaacaacgactgcacaggcttcacctgtgggagcgggcatgcccgcgaaGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCtg > 1:650459‑M2/62‑150 (MQ=255) ATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTT‑GTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCt < 1:415630‑M1/103‑1 (MQ=255) ATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTT‑GTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCt > 2:415630‑M1/1‑103 (MQ=255) gctccaacaacgactgcacaggcttcacctgtgggagcgggcatgcccgcgaaGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCtgt < 1:594947‑M2/90‑1 (MQ=255) gctccaacaacgactgcacaggcttcacctgtgggagcgggcatgcccgcgaaGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCtgt > 2:594947‑M2/54‑143 (MQ=255) tgtgCAGTCGTT‑GTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCCTTCCACCTCGGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCAtt < 1:511911/150‑1 (MQ=255) aGTCGTT‑GTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCac > 1:410682/1‑150 (MQ=255) gTCGTT‑GTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGa < 2:281323/103‑1 (MQ=255) gTCGTT‑GTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGa > 1:281323/1‑103 (MQ=255) gcgggcatgcccgcgaaGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCACGACGATCTCCTAc < 2:410682‑M2/133‑1 (MQ=255) tgcccgcgaaGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCacga < 1:179868‑M2/122‑1 (MQ=255) tgcccgcgaaGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCacga > 2:179868‑M2/11‑132 (MQ=255) ccgcgaaGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCACGACGATCTCCTACGCCGGCCCGt > 1:568174‑M2/8‑150 (MQ=255) aGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCACGACGATCTCCTACGCCGGCCCGTTGGTGa < 1:122075‑M2/149‑1 (MQ=255) | CCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTT‑GTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCACGACGATCTCCTACGCCGGCCCGTTGGTGA > NC_002947/3588065‑3588356 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |