New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2655400 | 26 (0.900) | 7 (0.250) | 7/254 | 2.4 | 21.2% | intergenic (+71/+99) | cysB/cysH | transcriptional regulator CysB/phosphoadenosine phosphosulfate reductase |
? | NC_002947 | = 2655479 | 27 (0.970) | intergenic (+150/+20) | cysB/cysH | transcriptional regulator CysB/phosphoadenosine phosphosulfate reductase |
GATGGCCAAGGCCATTCAGTGCCATAACAAGCAAGAGCTGGAAGAATTGTTCGAAGGCGTCGAACTGCCGGTGCACTGATTCGGGGGTGATGGGGCCGCTGTGGGAGTAACGGCCCTTGCTCAATGTCTAAAAGCTGGCGCGATCCCTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2655251‑2655400 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtAGGAGCGGGTTTACCCGCGAAGAAGACACCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGGATCGC < NC_002947/2655479‑2655390 GATGGCCAAGGCCATTCAGTGCCATAACAAGCAAGAGCTGGAAGAATTGTTCGAAGGCGTCGAACTGCCGGTGCACTGATTCGGGGGTGATGGGGCCGCTGTGGGAGTAACGGCCCTTGCTCAATGTCTAAAAGCTGGCGCGATCCCTGT < 1:713666/150‑1 TGGGGCCGCTGTGGGAGTAACGGCCCTTGCTCAATGTCTAAAAGCTGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAAGAAGACACCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGGATCGC < 2:79500/150‑1 CGCTGTGGGAGTAACGGCCCTTGCTCAATGTCTAAAAGCTGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAAGAAGACACCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGG > 1:231393/1‑139 CGCTGTGGGAGTAACGGCCCTTGCTCAATGTCTAAAAGCTGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAAGAAGACACCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGG < 2:231393/139‑1 GAGTAACGGCCCTTGCTCAATGTCTAAAAGCTGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAAGAAGACACCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAG < 1:297245/129‑1 GAGTAACGGCCCTTGCTCAATGTCTAAAAGCTGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAAGAAGACACCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAG > 2:297245/1‑129 GATCCCTGTGGGAGCGGGTTTACCCGCGAAGAAGACACCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGG < 1:60442/75‑1 GATCCCTGTGGGAGCGGGTTTACCCGCGAAGAAGACACCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGG > 2:60442/1‑75 GATGGCCAAGGCCATTCAGTGCCATAACAAGCAAGAGCTGGAAGAATTGTTCGAAGGCGTCGAACTGCCGGTGCACTGATTCGGGGGTGATGGGGCCGCTGTGGGAGTAACGGCCCTTGCTCAATGTCTAAAAGCTGGCGCGATCCCTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2655251‑2655400 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtAGGAGCGGGTTTACCCGCGAAGAAGACACCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGGATCGC < NC_002947/2655479‑2655390 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |