New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3415693 = | 19 (0.660) | 7 (0.260) | 7/248 | 2.4 | 27.5% | coding (1591/1830 nt) | PP_3029 | DNA cytosine methyltransferase family protein |
? | NC_002947 | 3415734 = | 19 (0.700) | coding (1550/1830 nt) | PP_3029 | DNA cytosine methyltransferase family protein |
TCACCGTTGTTCAGGTGCCCGCAGCGATCCTGCCGCCGGAGTTGTTGGTGAAGGCCCGCAAGTGCGCTCACTTCCTGCACAAGTACCTGCCGGAGCACTTCCCCGATCTAGTCGACCTGGTGCTGCTCGGCGAGCACGCACTGGTCGACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3415842‑3415693 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcgactAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGCCTTCACCAACAACTCCGGCGGCAGGATCGCTGCGGGCACCTGAACAACGGTGACCAGCGCCATGCGCTCCTTGGTCGGCAGGGTGTGCAT > NC_002947/3415734‑3415879 TCACCGTTGTTCAGGTGCCCGCAGCGATCCTGCCGCCGGAGTTGTTGGTGAAGGCCCGCAAGTGCGCTCACTTCCTGCACAAGTACCTGCCGGAGCACTTCCCCGATCTAGTCGACCTGGTGCTGCTCGGCGAGCACGCACTGGTCGACT > 1:521363/1‑150 ACCGTTGTTCAGGTGCCCGCAGCGATCCTGCCGCCGGAGTTGTTGGTGAAGGCCCGCAAGTGCGCTCACTTCCTGCACAAGTACCTGCCGGAGCACTTCCCCGATCTAGTCGACCTGGTGCTGCTCGGCGAGCACGCACTGG < 1:652831/142‑1 ACCGTTGTTCAGGTGCCCGCAGCGATCCTGCCGCCGGAGTTGTTGGTGAAGGCCCGCAAGTGCGCTCACTTCCTGCACAAGTACCTGCCGGAGCACTTCCCCGATCTAGTCGACCTGGTGCTGCTCGGCGAGCACGCACTGG > 2:652831/1‑142 TCGACCTGGTGCTGCTCGGCGAGCACGCACTGGTCGACTAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGCCTTCACCAACAACTCCGGCGGCAGGATCGCTGCGGGCACCTGAACAACGGTGACC > 1:719421/1‑150 GACCTGGTGCTGCTCGGCGAGCACGCACTGGTCGACTAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGC < 1:391625/93‑1 GACCTGGTGCTGCTCGGCGAGCACGCACTGGTCGACTAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGC > 2:391625/1‑93 CTGGTGCTGCTCGGCGAGCACGCACTGGTCGACTAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGCCTTCACCAACAACTCCGGCGGCAGGATCGCTGCGGGCACCTGAACAACGGTGACCAGCGC > 1:677190/1‑150 GCTGCTCGGCGAGCACGCACTGGTCGACTAGATCGGGGAAGTGCTCCGGCAGGTAC < 1:379409/56‑1 GCTGCTCGGCGAGCACGCACTGGTCGACTAGATCGGGGAAGTGCTCCGGCAGGTAC > 2:379409/1‑56 CTGCTCGGCGAGCACGCACTGGTCGACTAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGCCTTCACCAACAACTCCGGCGGCAGGATCGCTGCGGGCACCTGAACAACGGTGACCAGCGCCATGCG < 2:677190/150‑1 GACTAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGCCTTCACCAACCACTCCGGCGGCAGGATCGCTGCGGTCACATGAACAACGGTGACCAGCGCAATGCGCTTCTTGGTCTGCAGGGTGTGCAT > 2:347105/1‑150 TCACCGTTGTTCAGGTGCCCGCAGCGATCCTGCCGCCGGAGTTGTTGGTGAAGGCCCGCAAGTGCGCTCACTTCCTGCACAAGTACCTGCCGGAGCACTTCCCCGATCTAGTCGACCTGGTGCTGCTCGGCGAGCACGCACTGGTCGACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3415842‑3415693 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcgactAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGCCTTCACCAACAACTCCGGCGGCAGGATCGCTGCGGGCACCTGAACAACGGTGACCAGCGCCATGCGCTCCTTGGTCGGCAGGGTGTGCAT > NC_002947/3415734‑3415879 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |