New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3415693 = | 19 (0.660) | 7 (0.260) | 7/248 | 2.4 | 27.5% | coding (1591/1830 nt) | PP_3029 | DNA cytosine methyltransferase family protein |
? | NC_002947 | 3415734 = | 19 (0.700) | coding (1550/1830 nt) | PP_3029 | DNA cytosine methyltransferase family protein |
GGCCGGTTTCCTGGTTCTCGAACAGGCCGCGATCAAGGATGTAGTCGGGGCTGAAGCCTTGAGCGAGCTTCAGTTCCGGGGCCTTGAGCATGCGGAGGGTGAAGTCGACCAGTGCGTGCTCGCCGAGCAGCACCAGGTCGACTAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGCCTTCACCAACAACTCCGGCGGCAGGATCGCTGCGGGCACCTGAACAACGGTGACCAGCGCCATGCGCTCCTTGGTCGGCAGGGTGTGCAT > NC_002947/3415591‑3415879 | ggCCGGTTTCCTGGTTCTCGAACAGGCCGCGATCAAGGATGTAGTCGGGGCTGAAGCCTTGAGCGAGCTTCAGTTCCGGGGCCTTGAGCATGCGGAGGGTGAAGTCGACCAGTGCGTGCTCGCCGAGCAGCACCAGGTCGACTAGATCgg < 1:466058/150‑1 (MQ=255) cGGTTTCCTGGTTCTCGAACAGGCCGCGATCAAGGATGTAGTCGGGGCTGAAGCCTTGAGCGAGCTTCAGTTCCGGGGCCTTGAGCATGCGGAGGGTGAAGTCGACCAGTGCGTGCTCGCCGAGCAGCACCAGGTCGACTAGATCGGGGa > 1:147722/1‑150 (MQ=255) ctcGAACAGGCCGCGATCAAGGATGTAGTCGGGGCTGAAGCCTTGAGCGAGCTTCAGTTCCGGGGCCTTGAGCATGCGGAGGGTGAAGTCGACCAGTGCGTGCTCGCCGAGCAGCACCAGGTCGACTAGATCGGGGAAGTGCTCCGGCAg < 1:298139/150‑1 (MQ=255) ggggCTGAAGCCTTGAGCGAGCTTCAGTTCCGGGGCCTTGAGCATGCGGAGGGTGAAGTCGACCAGTGCGTGCTCGCCGAGCAGCACCAGGTCGACTAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCg > 1:370757/1‑150 (MQ=255) aaGCCTTGAGCGAGCTTCAGTTCCGGGGCCTTGAGCATGCGGAGGGTGAAGTCGACCAGTGCGTGCTCGCCGAGCAGCACCAGGTCGACTAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGCCTTc > 1:202469/1‑150 (MQ=255) gcgagcTTCAGTTCCGGGGCCTTGAGCATGCGGAGGGTGAAGTCGACCAGTGCGTGCTCGCCGAGCAGCACCAGGTCGACTAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGCCTTCACCaacaac > 2:4434/1‑150 (MQ=255) gTTCCGGGGCCTTGAGCATGCGGAGGGTGAAGTCGACCAGTGCGTGCTCGCCGAGCAGCACCAGGTCGACTAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGCCTTCACCAACAACTCCGGCGGCa < 2:147722/150‑1 (MQ=255) ggggCCTTGAGCATGCGGAGGGTGAAGTCGACCAGTGCGTGCTCGCCGAGCAGCACCAGGTCGACTAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGCCTTCACCAACAACTCCGGCGGCAGGATc < 1:4434/150‑1 (MQ=255) ggCCTTGAGCATGCGGAGGGTGAAGTCGACCAGTGCGTGCTCGCCGAGCAGCACCAGGTCGACTAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCgg < 1:453561/118‑1 (MQ=255) ggCCTTGAGCATGCGGAGGGTGAAGTCGACCAGTGCGTGCTCGCCGAGCAGCACCAGGTCGACTAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCgg > 2:453561/1‑118 (MQ=255) gCGGAGGGTGAAGTCGACCAGTGCGTGCTCGCCGAGCAGCACCAGGTCGACTAGATCGGGGAAGTGCTCCGGCAg < 1:670948/75‑1 (MQ=255) gCGGAGGGTGAAGTCGACCAGTGCGTGCTCGCCGAGCAGCACCAGGTCGACTAGATCGGGGAAGTGCTCCGGCAg > 2:670948/1‑75 (MQ=255) tGAAGTCGACCAGTGCGTGCTCGCCGAGCAGCACCAGGTCGACTAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGCCTTCACCAACAACTCCGGCGGCAGGATCGCTGCGGGCACCTGAACAACgg > 2:194608/1‑150 (MQ=255) AGTCGACCAGTGCGTGCTCGCCGAGCAGCACCAGGTCGACTAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGCCTTCACCAACAACTCCGGCGGCAGGATCGCTGCGGGCACCTGAACAACGGTGa > 1:521363‑M1/1‑150 (MQ=255) tcgacctggtgctgctcggcgagcacgcactggtcgactAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGCCTTCACCAACAACTCCGGCGGCAGGATCGCTGCGGGCACCTGAACAACGGTGAcc > 1:719421‑M2/40‑150 (MQ=255) gacctggtgctgctcggcgagcacgcactggtcgactAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGc > 2:391625‑M2/38‑93 (MQ=255) gacctggtgctgctcggcgagcacgcactggtcgactAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGc < 1:391625‑M2/56‑1 (MQ=255) CCAGTGCGTGCTCGCCGAGCAGCACCAGGTCGACTAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGCCTTCACCAACAACTCCGGCGGCAGGATCGCTGCGGGCACCTGAACAACGGt < 1:652831‑M1/142‑1 (MQ=255) CCAGTGCGTGCTCGCCGAGCAGCACCAGGTCGACTAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGCCTTCACCAACAACTCCGGCGGCAGGATCGCTGCGGGCACCTGAACAACGGt > 2:652831‑M1/1‑142 (MQ=255) ctggtgctgctcggcgagcacgcactggtcgactAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGCCTTCACCAACAACTCCGGCGGCAGGATCGCTGCGGGCACCTGAACAACGGTGACCAgcgc > 1:677190‑M2/35‑150 (MQ=255) gctgctcggcgagcacgcactggtcgactAGATCGGGGAAGTGCTCCGGCAGGTAc < 1:379409‑M2/27‑1 (MQ=255) gctgctcggcgagcacgcactggtcgactAGATCGGGGAAGTGCTCCGGCAGGTAc > 2:379409‑M2/30‑56 (MQ=255) ctgctcggcgagcacgcactggtcgactAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGCCTTCACCAACAACTCCGGCGGCAGGATCGCTGCGGGCACCTGAACAACGGTGACCAGCGCCATgcg < 2:677190‑M2/122‑1 (MQ=255) tgcTCGCCGAGCAGCACCAGGTCGACTAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCGGGAATTGAGCGCACTTGCGGGACTTCACCAACAACTCCGGCGGCAGGATCGCTGCGGGCACCTGAACAACGGTGACCAGCGCCATgcgc > 2:137202/1‑150 (MQ=255) tCGCCGAGCAGCACCAGGTCGACTAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGCCTTCACCAACAACTCCGGCGGCAGGATCGCTGCGGGCACCTGAACAACGGTGACCAGCGCCATGCGCTcc > 2:220532/1‑150 (MQ=255) ccGAGCAGCACCAGGTCGACTAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGCCTTCACCAACACCTCCGGCGGCAGGATCGCTGCTGGCACCTGAACAACGGTGACCAGCGCCATGCGCTCCTTg < 2:300521/150‑1 (MQ=255) cagcaCCAGGTCGACTAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGCCTTCACCAACAACTCCGGCGGCAGGATCGCTGCGGGCACCTAAACAACGTTAATCAGTGCCATGCGCTCCTTGGTcag > 2:301655/1‑148 (MQ=255) gcaCCAGGTCGACTAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGCCTTCACCAACAACTCCGGCGGCAGGATCGCTGCGGGCACCTGAACAACGGTGACCAGCGCCATGCGCTCCTTGGTCGGCa < 1:333453/150‑1 (MQ=255) caCCAGGTCGACTAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGCCTTCACCAACAACTCCGGCGGCAGGATCGCTGCGGGCACCTGAACAACGGTGACCAGCGCCATGCGCTCCTTGGTCGGCAg > 2:15557/1‑150 (MQ=255) gactAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGCCTTCACCAACCACTCCGGCGGCAGGATCGCTGCGGTCACATGAACAACGGTGACCAGCGCAATGCGCTTCTTGGTCTGCAGGGTGTGCAt > 2:347105‑M2/5‑150 (MQ=255) | GGCCGGTTTCCTGGTTCTCGAACAGGCCGCGATCAAGGATGTAGTCGGGGCTGAAGCCTTGAGCGAGCTTCAGTTCCGGGGCCTTGAGCATGCGGAGGGTGAAGTCGACCAGTGCGTGCTCGCCGAGCAGCACCAGGTCGACTAGATCGGGGAAGTGCTCCGGCAGGTACTTGTGCAGGAAGTGAGCGCACTTGCGGGCCTTCACCAACAACTCCGGCGGCAGGATCGCTGCGGGCACCTGAACAACGGTGACCAGCGCCATGCGCTCCTTGGTCGGCAGGGTGTGCAT > NC_002947/3415591‑3415879 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |