New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2446426 = | 19 (0.820) | 3 (0.140) | 3/240 | NT | 13.9% | coding (657/708 nt) | PP_2144 | TetR family transcriptional regulator |
? | NC_002947 | 2446446 = | 19 (0.860) | coding (677/708 nt) | PP_2144 | TetR family transcriptional regulator |
GCAAAGCCATACAGGCACTGGTCAGCAAGGGAGATGCGAAGTAGATCGAAATCGGGCATGGGCGCTAGCTTAGCGGAAGCGCCCCGCCACGCCCAGCCTTCAGGCCTTGGCGGTAGCCGAACCGGTCTTTGTGCGCGGGCGCAGCTGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2446576‑2446426 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcaCAAAGACCGGTTCGGCTACCGCCAAGGCCTGAAGGCTGGGCGTGGCGGGGCGCTTCCGCTAAGCTAGCGC > NC_002947/2446446‑2446515 GCAAAGCCATACAGGCACTGGTCAGCAAGGGAGATGCGAAGTAGATCGAAATCGGGCATGGGCGCTAGCTTAGCGGAAGCGCCCCGCCACGCCCAGCCTTCAGGCCTTGGCGGTAGCCGAACCGGTCTTTGTGCGCGGGCGCAGCTGCGC > 2:231457/1‑150 GTCAGCAAGGGAGATGCGAAGTAGATCGAAATCGGGCATGGGCGCTAGCTTAGCGGAAGCGCCCCGCCACGCCCAGCCTTCAGGCCTTGGCGGTAGCCGAACCGGTCTTTGTGCGCAGCTGCGCCCGCGCACAAAGACCGGTTCGGCTAC < 2:202678/150‑1 TTTGTGCGCGGGCGCAGCTGCGCACAAAGACCGGTTCGGCTACCGCCAAGGCCTGAAGGCTGGGCGTGGCGGGGCGCTTCCGCTAAGCTAGCGC > 1:251852/1‑94 TTTGTGCGCGGGCGCAGCTGCGCACAAAGACCGGTTCGGCTACCGCCAAGGCCTGAAGGCTGGGCGTGGCGGGGCGCTTCCGCTAAGCTAGCGC < 2:251852/94‑1 GCAAAGCCATACAGGCACTGGTCAGCAAGGGAGATGCGAAGTAGATCGAAATCGGGCATGGGCGCTAGCTTAGCGGAAGCGCCCCGCCACGCCCAGCCTTCAGGCCTTGGCGGTAGCCGAACCGGTCTTTGTGCGCGGGCGCAGCTGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2446576‑2446426 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcaCAAAGACCGGTTCGGCTACCGCCAAGGCCTGAAGGCTGGGCGTGGCGGGGCGCTTCCGCTAAGCTAGCGC > NC_002947/2446446‑2446515 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |