New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2504290 =25 (1.080)3 (0.140) 3/234 NT 11.2% coding (34/1146 nt) yliI aldose sugar dehydrogenase
?NC_002947 2504328 = 24 (1.110)coding (72/1146 nt) yliI aldose sugar dehydrogenase

TCGGTCACCAGCATGTCCTTGCCACCGGGCAGGAAGGCCAGGGCCCAGGGGTTGCGCAGGCCATCGGCAAGCGTGTCGACGATCAAGGTGCCTTCTTCGCTGGGGAACCGCTGTTCGGCCGCTGCATGCGCCCACAGTGGCAGTAGCGCAGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2504444‑2504290
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcggcCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATGGCCTGCGCAACCCCTGGGCCCTGGCCTTCCTGCCCGGTGGCAAGGACATGCTGGTGACCGAGCGCGCCGGCAACCTGCGGCTGGTCAATGCC  >  NC_002947/2504328‑2504475
                                                                                                                                                                                                                                                                                                               
TCGGTCACCAGCATGTCCTTGCCACCGGGCAGGAAGGCCAGGGCCCAGGGGGTGCGCAGGCCATCGGCAAGCGTGTCGACGATCAAGGTGCCTTCTTCGCTGGGGAACCGCTGTTCGGCCGCTGCATGCGCCCACAGTGGCAGTAGCGCA                                                                                                                                                           >  2:242537/1‑150
    TCACCAGCATGTCCTTGCCACCGGGCAGGAAGGCCAGGGCCCAGGGGTTGCGCAGGCCATCGGCAAGCGTGTCGACGATCAAGGTGCCTTCTTCGCTGGGGAACCGCTGTTCGGCCGCTGCATGCGCCCACAGTGGCAGTAGCGCAGCGG                                                                                                                                                       >  2:532260/1‑150
        CAGCATGTCCTTGCCACCGGGCAGGAAGGCCAGGGCCCAGGGGTTGCGCAGGCCATCGGCAAGCGTGTCGACGATCAAGGTGCCTTCTTCGCTGGGGAACCGCTGTTCGGCCGCTGCATGCGCCCACAGTGGCAGTAGCGCAG                                                                                                                                                          <  1:414145/143‑1
        CAGCATGTCCTTGCCACCGGGCAGGAAGGCCAGGGCCCAGGGGTTGCGCAGGCCATCGGCAAGCGTGTCGACGATCAAGGTGCCTTCTTCGCTGGGGAACCGCTGTTCGGCCGCTGCATGCGCCCACAGTGGCAGTAGCGCAG                                                                                                                                                          >  2:414145/1‑143
                                                                                                                    GGCCGCTGCATGCGCCCACAGTGGCAGTAGCGCAGCGGCCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATGGCCTGCGCAACCCCTGGGCCCTGGCCTTCCTGCCCGGTGGCAAGGACATGC                                           <  1:435604/146‑1
                                                                                                                    GGCCGCTGCATGCGCCCACAGTGGCAGTAGCGCAGCGGCCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATGGCCTGCGCAACCCCTGGGCCCTGGCCTTCCTGCCCGGTGGCAAGGACATGC                                           >  2:435604/1‑146
                                                                                                                     GCCGCTGCATGCGCCCACAGTGGCAGTAGCGCAGCGGCCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATGGCCTGCGCAACCCCTGGGCCCTGGCCTTCCTGCCCGGTGGCAAGGACATGCTGGTG                                      >  1:113216/1‑150
                                                                                                                                                         GCCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATGGCCTGCGCAACCCCTGGGCCCTGGCCTTCCTGCCCGGTGGCAAGGACATGCTGGTGACCGAGCGCGCCGGCAACCTGCGGCTGGTCAATGCC  >  2:302611/1‑150
                                                                                                                                                                                                                                                                                                               
TCGGTCACCAGCATGTCCTTGCCACCGGGCAGGAAGGCCAGGGCCCAGGGGTTGCGCAGGCCATCGGCAAGCGTGTCGACGATCAAGGTGCCTTCTTCGCTGGGGAACCGCTGTTCGGCCGCTGCATGCGCCCACAGTGGCAGTAGCGCAGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2504444‑2504290
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcggcCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATGGCCTGCGCAACCCCTGGGCCCTGGCCTTCCTGCCCGGTGGCAAGGACATGCTGGTGACCGAGCGCGCCGGCAACCTGCGGCTGGTCAATGCC  >  NC_002947/2504328‑2504475

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.