New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2504290 =	25 (1.080)	3 (0.140)	3/234	NT	11.2%	coding (34/1146 nt)	yliI	aldose sugar dehydrogenase
	?	NC_002947	2504328 =	24 (1.110)					coding (72/1146 nt)	yliI	aldose sugar dehydrogenase

ACCGAACCTGGAACCCACCCGGCCACCGCGCGACAACCCACGTGCGCCTTAAGCCCACTTGAAAGGAATCCGGCATGCTTCGAGCACACTGGCTAGCCACCCTGACCGCCGCTGCGCTACTGCCACTGTGGGCGCATGCAGCGGCCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATGGCCTGCGCAACCCCTGGGCCCTGGCCTTCCTGCCCGGTGGCAAGGACATGCTGGTGACCGAGCGCGCCGGCAACCTGCGGCTGGTCAATGCC  >  NC_002947/2504183‑2504475                                                                                                                                                  |                                                                                                                                                    gcatgtccttgccaccgggcaggaaggccagggcccaggggttgcgcaggccatcggcaagcgtgtcgacgatcaaggtgccttcttcgctggggaaccgctgttcgGCCGCTGCGCTACTGCCACTGTGGGCGCATGCAGCGGcc                                                                                                                                                     >  2:435604‑M1/108‑146 (MQ=255) gcatgtccttgccaccgggcaggaaggccagggcccaggggttgcgcaggccatcggcaagcgtgtcgacgatcaaggtgccttcttcgctggggaaccgctgttcgGCCGCTGCGCTACTGCCACTGTGGGCGCATGCAGCGGcc                                                                                                                                                     <  1:435604‑M1/39‑1 (MQ=255)             acccacccGGCCACCGCGCGACAACCCACGTGCGCCTTAAGCCCACTTGAAAGGAATCCGGCATGCTTCGAGCACACTGGCTAGCCACCCTGACCGCCGCTGCGCTACTGCCACTGTGGGCGCATGCAGCGGCCGAACAGCGGTTCCCCa                                                                                                                                     >  2:139791/1‑150 (MQ=255)               ccacccGGCCACCGCGCGACAACCCACGTGCGCCTTAAGCCCACTTGAAAGGAATCCGGCATGCTTCGAGCACACTGGCTAGCCACCCTGACCGCCGCTGCGCTACTGCCACTGTGGGCGCATGCAGCGGCCGAACAGCGGTTCCCCAGc                                                                                                                                   <  2:610916/150‑1 (MQ=255)                 acccGGCCACCGCGCGACAACCCACGTGCGCCTTAAGCCCACTTGAAAGGAATCCGGCATGCTTCGAGCACACTGGCTAGCCACCCTGACCGCCGCTGCGCTACTGCCACTGTGGGCGCATGCAGCGGCCGAACa                                                                                                                                                >  1:282065/1‑135 (MQ=255)                 acccGGCCACCGCGCGACAACCCACGTGCGCCTTAAGCCCACTTGAAAGGAATCCGGCATGCTTCGAGCACACTGGCTAGCCACCCTGACCGCCGCTGCGCTACTGCCACTGTGGGCGCATGCAGCGGCCGAACa                                                                                                                                                <  2:282065/135‑1 (MQ=255)                                   aaCCCACGTGCGCCTTAAGCCCACTTGAAAGGAATCCGGCATGCTTCGAGCACACTGGCTAGCCACCCTGACCGCCGCTGCGCTACTGCCACTGTGGGCGCATGCAGCGGCCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGAtcgt                                                                                                               <  1:217869/150‑1 (MQ=255)                                      ccACGTGCGCCTTAAGCCCACTTGAAAGGAATCCGGCATGCTTCGAGCACACTGGCTAGCCACCCTGACCGCCGCTGCGCTACTGCCACTGTGGGCGCATGCAGCGGCCGAACAGCGGTAACCCAGCGAAGAAGGCAACTTGATCGTCGa                                                                                                            >  1:436014/1‑150 (MQ=255)                                       cACGTGCGCCTTAAGCCCACTTGAAAGGAATCCGGCATGCTTCGAGCACACTGGCTAGCCACCCTGACCGCCGCTGCGCTACTGCCACTGTGGGCGCATGCAGCGGCCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGac                                                                                                           >  1:42790/1‑150 (MQ=255)                                                    aGCCCACTTGAAAGGAATCCGGCATGCTTCGAGCACACTGGCTAGCCACCCTGACCGCCGCTGCGCTACTGCCACTGTGGGCGCATGCAGCGGCCGATGTGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATg                                                                                              <  1:15921/150‑1 (MQ=255)                                                    aGCCCACTTGAAAGGAATCCGGCATGCTTCGAGCACACTGGCTAGCCACCCTGACCGCCGCTGCGCTACTGCCACTGTGGGCGCATGCAGCGGCCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATg                                                                                              >  2:614752/1‑150 (MQ=255)                                                       ccACTTGAAAGGAATCCGGCATGCTTCGAGCACACTGGCTAGCCACCCTGACCGCCGCTGCGCTACTGCCACTGTGGGCGCATGCAGCGGCCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATGGcc                                                                                           >  2:237860/1‑150 (MQ=255)                                                          cTTGAAAGGAATCCGGCATGCTTCGAGCACACTGGCTAGCCACCCTGACCGCCGCTGCGCTACTGCCACTGTGGGCGCATGCAGCGGCCGAACAGCGGTTCCCCAGCGAAGAAGGCACATTGATCGTCGACCCGCTTGCCGATGGCCTgc                                                                                        >  1:463001/1‑150 (MQ=255)                                                                    aTCCGGCATGCTTCGAGCACACTGGCTAGCCACCCTGACCGCCGCTGCGCTACTGCCACTGTGGGCGCATGCAGCGGCCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATGGCCTGCGCAACCCCTg                                                                              <  2:405516/150‑1 (MQ=255)                                                                           aTGCTTCGAGCACACTGGCTAGCCACCCTGACCGCCGCTGCGCTACTGCCACTGTGGGCGCATGCAGCGGCCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATGGCCTGCGCAACCCCTGGGCCCTg                                                                       >  2:189829/1‑150 (MQ=255)                                                                               ttCGAGCACACTGGCTAGCCACCCTGACCGCCGCTGCGCTACTGCCACTGTGGGCGCATGCAGCGGCCGAAc                                                                                                                                                 >  2:19744/1‑72 (MQ=255)                                                                               ttCGAGCACACTGGCTAGCCACCCTGACCGCCGCTGCGCTACTGCCACTGTGGGCGCATGCAGCGGCCGAAc                                                                                                                                                 <  1:19744/72‑1 (MQ=255)                                                                                       cacTGGCTAGCCACCCTGACCGCCGCTGCGCTACTGCCACTGTGGGCGCATGCAGCGGCCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATGGCCTGCGCAACCCCTGGGCCCTGGCCTTCCTGccc                                                           >  2:415597/1‑150 (MQ=255)                                                                                        acTGGCTAGCCACCCTGACCGCCGCTGCGCTACTGCCACTGTGGGCGCATGCAGCGGCCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATGGCCTGCGCAACCCCTGGGCCCTGGCCTTCCTGCCCg                                                          >  1:556343/1‑150 (MQ=255)                                                                                        acTGGCTAGCCACCCTGACCGCCGCTGCGCTACTGCCACTGTGGGCGCATGCAGCGGCCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATGGCCTGCGCAACCCCTGGGCCCTGGCCTTCCTGCCCg                                                          >  1:532260/1‑150 (MQ=255)                                                                                          tGGCTAGCCACCCTGACCGCCGCTGCGCTACTGCCACTGTGGGCGCATGCAGCGGCCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATGGCCTGCGCAACCCCTGGGCCCTGGcc                                                                    >  2:298484/1‑138 (MQ=255)                                                                                          tGGCTAGCCACCCTGACCGCCGCTGCGCTACTGCCACTGTGGGCGCATGCAGCGGCCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATGGCCTGCGCAACCCCTGGGCCCTGGcc                                                                    <  1:298484/138‑1 (MQ=255)                                                                                                gCCACCCTGACCGCCGCTGCGCTACTGCCACTGTGGGCGCATGCAGCGGCCGAACAGCGGTTCCCCAGCGAAGAAGGCAACTTGATCGTCGACACGCTTGCCGATGGCCTGCGCAACCCCTGGGCCCTGGCCTTCCTGCCCGGTGGCAAg                                                  >  1:267863/1‑150 (MQ=255)                                                                                                           ggccgctgcatgcgcccacagtggcagtagcgcagcggcCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATGGCCTGCGCAACCCCTGGGCCCTGGCCTTCCTGCCCGGTGGCAAGGACATGc                                           <  1:435604‑M2/107‑1 (MQ=255)                                                                                                           ggccgctgcatgcgcccacagtggcagtagcgcagcggcCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATGGCCTGCGCAACCCCTGGGCCCTGGCCTTCCTGCCCGGTGGCAAGGACATGc                                           >  2:435604‑M2/40‑146 (MQ=255)                                                                                                            gccgctgcatgcgcccacagtggcagtagcgcagcggcCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATGGCCTGCGCAACCCCTGGGCCCTGGCCTTCCTGCCCGGTGGCAAGGACATGCTGGTg                                      >  1:113216‑M2/39‑150 (MQ=255)                                                                                                             CCGCTGCGCTACTGCCACTGTGGGCGCATGCAGCGGCCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATGGCCTGCGCAACCCCTGGGCCCTGGCCTTCCTGCCCGGTGGCAAGGACATGCTGGTGa                                     >  2:532260‑M1/1‑150 (MQ=255)                                                                                                                CTGCGCTACTGCCACTGTGGGCGCATGCAGCGGCCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATGGCCTGCGCAACCCCTGGGCCCTGGCCTTCCTGCCCGGTGGCAAGGACATGCTg                                         >  2:414145‑M1/1‑143 (MQ=255)                                                                                                                CTGCGCTACTGCCACTGTGGGCGCATGCAGCGGCCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATGGCCTGCGCAACCCCTGGGCCCTGGCCTTCCTGCCCGGTGGCAAGGACATGCTg                                         <  1:414145‑M1/143‑1 (MQ=255)                                                                                                                 TGCGCTACTGCCACTGTGGGCGCATGCAGCGGCCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATGGCCTGCGCACCCCCTGGGCCCTGGCCTTCCTGCCCGGTGGCAAGGACATGCTGGTGACCGa                                 >  2:242537‑M1/1‑150 (MQ=255)                                                                                                                    gcTACTGCCACTGTGGGCGCATGCAGCGGCCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATGGCCTGCGCAACCCCTGGGCCCTGGCCTTCCTGCCCGGTGGCAAGGACATGCTGGTGACCGAgcg                              >  2:422935/1‑150 (MQ=255)                                                                                                                     cTACTGCGACTGTGGGCGCATGCAGCGGCCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATGGCCTGCGCAACCCCTGGGCCCTGGCCTTCCTGCCCGGTGGCAAGGACATGCTGGTGGCCGAgcgc                             >  2:27915/1‑150 (MQ=255)                                                                                                                           ccACTGTGGGCGCATGCAGCGGCCGAACAGCGGTTCCCCAGCGAAGAAGGCCCCTTGATCGTCGACACGCTTGCCGATGGCCTGCGCAACCCCTGGGCCCTGGCCTTCCTGCCCGGTGGCAAGGACATGCTGGTGACCGAGCGCGCCGGc                       >  2:86614/1‑150 (MQ=255)                                                                                                                           ccACTGTGGGCGCATGCAGCGGCCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACAAGATTGCCGATTGCCTGCGCAACCCCTGGGCCCTGGCCTTCCTGCCCGGTGGCAAGGACATGCTGGTGACCGAGCGCGCCGGc                       >  2:426370/1‑150 (MQ=255)                                                                                                                               tgtgGGCGCATGCAGCGGCCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATGGCCTGCGCAACCCCTGGGCCCTGGCCTTCCTGCCCGGTGGCAAGGACATGCTGGTGACCGAGCGCGCCGGCCAcc                   >  2:166865/1‑150 (MQ=255)                                                                                                                                                gcCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATGGCCTGCGCAACCCCTGGGCCCTGGCCTTCCTGCCCGGTGGCAAGGACATGCTGGTGACCGAGCGCGCCGGCAACCTGCGGCTGGTCAATGcc  >  2:302611‑M2/3‑150 (MQ=255)                                                                                                                                                  |                                                                                                                                                    ACCGAACCTGGAACCCACCCGGCCACCGCGCGACAACCCACGTGCGCCTTAAGCCCACTTGAAAGGAATCCGGCATGCTTCGAGCACACTGGCTAGCCACCCTGACCGCCGCTGCGCTACTGCCACTGTGGGCGCATGCAGCGGCCGAACAGCGGTTCCCCAGCGAAGAAGGCACCTTGATCGTCGACACGCTTGCCGATGGCCTGCGCAACCCCTGGGCCCTGGCCTTCCTGCCCGGTGGCAAGGACATGCTGGTGACCGAGCGCGCCGGCAACCTGCGGCTGGTCAATGCC  >  NC_002947/2504183‑2504475

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.