New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3052758 =	23 (1.000)	4 (0.180)	4/234	NT	14.4%	coding (1415/1899 nt)	PP_2664	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	3052825 =	26 (1.200)					coding (1482/1899 nt)	PP_2664	two‑component system sensor histidine kinase/response regulator

ATGCCCGCGCAAATCGCCGCATCGTTATCCAGCACCCACACCCTCGCCCCGCGCAAGCGTTCGAGCATCGGCTCGCAGATAACCTGGCTCGGCTGGGCTTTGGGAGCAGTGGTGCTCAGCGGCACCTCGACAGCGAACACCGAGCCTTTGCCCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3052914‑3052758 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccagccGAGCCAGGTTATCTGCGAGCCGATGCTCGAACGCTTGCGCGGGGCGAGGGTGTGGGTGCTGGATAACGATGCGGCGATTTGCGCGGGCATGCGCACTTTGCTGGAAGGTTGGGGCTGCCGTGTGGTGACTGCGCTGTCGGA  >  NC_002947/3052825‑3052965                                                                                                                                                                                                                                                                                                            ATGCCCGCGCAAATCGCCGCATCGTTATCCAGCACCCACACCCTCGCCCCGCGCAAGCGTTCGAGCATCGGCTCGCAGATAACCTGGCTCGGCTGGGCTTTGGGAGCAGTGGTGCTCAGCGGCACCTCGACAGCGAACACCGAGCCTTTG                                                                                                                                                      >  2:187162/1‑150                                                                                            GCTGGGCTTTGGGAGCAGTGGTGCTCAGCGGCACCTCGACAGCGAACACCGAGCCTTTGCCCAGCCGAGCCAGGTTATCTGCGAGCCGATGCTCGAACGCTTGCGCGGGGCGAGGGTGTGGGTGCTGGATAACGATGCGGCGATTTGCGC                                                           >  2:440671/1‑150                                                                                                   TTTGGGAGCAGTGGTGCTCAGCGGCACCTCGACAGCGAACACCGAGCCTTTGCCCAGCCGAGCCAGGTTATCTGCGAGCCGATGCTCGAACGCTTGCGCGGGGCGAGG                                                                                              >  1:430797/1‑108                                                                                                   TTTGGGAGCAGTGGTGCTCAGCGGCACCTCGACAGCGAACACCGAGCCTTTGCCCAGCCGAGCCAGGTTATCTGCGAGCCGATGCTCGAACGCTTGCGCGGGGCGAGG                                                                                              <  2:430797/108‑1                                                                                                                   CTCAGCGGCACCTCGACAGCGAACACCGAGCCTTTGCCCAGCCGAGCCAGGTTATCTGCGAGCCGATGCTCGAACGCTTGCGCGGGGCGAGGGTGTGGGTGCTGGATAACGATGCGGCGATTTGCGCGGGCATGCGCACTTTGCTGGAAG                                    <  1:440671/150‑1                                                                                                                                                     aacccgaCCGGGCCAGGTTATTTGCGATCCTTTTTTCGAACGCTTGCGCGGGGCGAGGGTGTGGGTGCTGGATAACGATGCGGCGATTTGCGCGGGCATGCGCACTTTGCTGGAAGGTTGGGGCTGCCGTGTGGTGACTGCGCTGTCGGA  <  2:497467/143‑1                                                                                                                                                                                                                                                                                                            ATGCCCGCGCAAATCGCCGCATCGTTATCCAGCACCCACACCCTCGCCCCGCGCAAGCGTTCGAGCATCGGCTCGCAGATAACCTGGCTCGGCTGGGCTTTGGGAGCAGTGGTGCTCAGCGGCACCTCGACAGCGAACACCGAGCCTTTGCCCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3052914‑3052758 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccagccGAGCCAGGTTATCTGCGAGCCGATGCTCGAACGCTTGCGCGGGGCGAGGGTGTGGGTGCTGGATAACGATGCGGCGATTTGCGCGGGCATGCGCACTTTGCTGGAAGGTTGGGGCTGCCGTGTGGTGACTGCGCTGTCGGA  >  NC_002947/3052825‑3052965

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.