New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3460753 | 27 (1.170) | 3 (0.140) | 3/240 | NT | 10.2% | coding (665/1017 nt) | PP_3076 | ABC transporter permease |
? | NC_002947 | = 3460786 | 27 (1.220) | coding (632/1017 nt) | PP_3076 | ABC transporter permease |
GGCATTGGGCAAGATATGCCGCAACATCACCTGACTGTCCGGTAACCCCAACGCCCGCGCTGCCTTTACATACTCCAGGTTGCGCCCACGCAGGAACTCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3460650‑3460753 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcTGTTCTCCTGGCTGACCCTGGTCGACGTCGTGCGCGCCGAGTTCCT < NC_002947/3460786‑3460741 GGCATTGGGCAAGATATGCCGCAACATCACCTGACTGTCCGGTAACCCCAACGCCCGCGCTGCCTTTACATACTCCAGGTTGCGCCCACGCAGGAACTCGGCGCTGTTCTCCTGGCTGACCCTGGTCGACGTCGTGCGCGCCGAGTTCCT < 1:74380/150‑1 CCGCAACATCACCTGACTGTCCGGTAACCCCAACGCCCGCGCTGCCTTTACATACTCCAGGTTGCGCCCACGCAGGAACTCGGCGCTGTTCTCCTGGCTGACCCTGGTCGACGTCGTGCGCGCCGA < 1:231324/126‑1 CCGCAACATCACCTGACTGTCCGGTAACCCCAACGCCCGCGCTGCCTTTACATACTCCAGGTTGCGCCCACGCAGGAACTCGGCGCTGTTCTCCTGGCTGACCCTGGTCGACGTCGTGCGCGCCGA > 2:231324/1‑126 GGCATTGGGCAAGATATGCCGCAACATCACCTGACTGTCCGGTAACCCCAACGCCCGCGCTGCCTTTACATACTCCAGGTTGCGCCCACGCAGGAACTCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3460650‑3460753 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcTGTTCTCCTGGCTGACCCTGGTCGACGTCGTGCGCGCCGAGTTCCT < NC_002947/3460786‑3460741 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |