| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3562695 = | 25 (1.080) | 4 (0.180) | 4/236 | NT | 16.1% | coding (1172/1296 nt) | PP_3146 | oxidoreductase |
| ? | NC_002947 | 3562720 = | 18 (0.820) | coding (1147/1296 nt) | PP_3146 | oxidoreductase | |||||
GCACCCTAACGTGTATTACGCCCAGGGCTATTCCGGGCACGGGCTGAACGTGACGCACTGGACGGCGAAACTGCTGGCCGAAAGCATCGCCCTCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3562793‑3562695‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggccaGCAGTTTCGCCGTCCAGTGCGTCACGTTCAGCCCGTGCCCGGAATAGCCCTGGGCGTAATACACGTTAGGGTGCTG > NC_002947/3562720‑3562795 GCACCCTAACGTGTATTACGCCCAGGGCTATTCCGGGCACGGGCTGAACGTGACGCACTGGACGGCGAAACTGCTGGCCGAAAGCATCGCCCTCGGC < 1:536253/97‑1GCACCCTAACGTGTATTACGCCCAGGGCTATTCCGGGCACGGGCTGAACGTGACGCACTGGACGGCGAAACTGCTGGCCGAAAGCATCGCCCTCGGC > 2:536253/1‑97 TATTCCGGGCACGGGCTGAACGTGACGCACTGGACGGCGAAACTGCTGGCCGAAAGCATCGCCCTCGGCCA < 1:95278/71‑1 TATTCCGGGCACGGGCTGAACGTGACGCACTGGACGGCGAAACTGCTGGCCGAAAGCATCGCCCTCGGCCA > 2:95278/1‑71 TGCTGGCCGAAAGCATCGCCCTCGGCCAGCAGTTTCGCCGTCCAGTGCGTCACGTTCAGCCCGTGCCCGGAATAGCCCTGGGCGTAATACACGTTAGGGTGCTG > 1:25701/1‑104 TGCTGGCCGAAAGCATCGCCCTCGGCCAGCAGTTTCGCCGTCCAGTGCGTCACGTTCAGCCCGTGCCCGGAATAGCCCTGGGCGTAATACACGTTAGGGTGCTG < 2:25701/104‑1 TGGCCGAAAGCATCGCCCTCGGCCAGCAGTTTCGCCGTCCAGTGCGTCACGTTCAGCCCGTGCCCGGAATAGCCCTGGGCGTAATA > 1:426658/1‑86 TGGCCGAAAGCATCGCCCTCGGCCAGCAGTTTCGCCGTCCAGTGCGTCACGTTCAGCCCGTGCCCGGAATAGCCCTGGGCGTAATA < 2:426658/86‑1 AGCAGTTTCGCCGTCCAGTGCGTCACGTTCAGCCCGTGCCCGGAATAGCCCTGGGCGTAATACACGTTAGG < 1:497667/71‑1 AGCAGTTTCGCCGTCCAGTGCGTCACGTTCAGCCCGTGCCCGGAATAGCCCTGGGCGTAATACACGTTAGG > 2:497667/1‑71 GCACCCTAACGTGTATTACGCCCAGGGCTATTCCGGGCACGGGCTGAACGTGACGCACTGGACGGCGAAACTGCTGGCCGAAAGCATCGCCCTCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3562793‑3562695‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggccaGCAGTTTCGCCGTCCAGTGCGTCACGTTCAGCCCGTGCCCGGAATAGCCCTGGGCGTAATACACGTTAGGGTGCTG > NC_002947/3562720‑3562795 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |