New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4276970 = | 28 (1.210) | 6 (0.270) | 6/244 | NT | 18.4% | coding (322/1236 nt) | glcF | glycolate oxidase iron‑sulfur subunit |
? | NC_002947 | 4277012 = | 26 (1.150) | coding (364/1236 nt) | glcF | glycolate oxidase iron‑sulfur subunit |
GTGTGGTGACTTGCGCCGGCAACTTGCGTTTGACTGAGGCCGGTAGCAGCGGGCGCAGCACCTGGCCGCTGCGGGTCAGGGCCTTGAACAGTGCCGGGCGCGGCACCACCGCACGCAGGCCCAGGCGCAACAGGCGCTGGCCGAGCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4277120‑4276970 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAACGCAAGTTGCCGGCGCAAGTCACCACACCGGGCCAGCGTCCGGCAGTGCGCCATGCACGCCGGAT > NC_002947/4277012‑4277157 GTGTGGTGACTTGCGCCGGCAACTTGCGTTTGACTGAGGCCGGTAGCAGCGGGCGCAGCACCTGGCCGCTGCGGGTCAGGGCCTTGAACAGTGCCGGGCGCGGCACCACCGCACGCAGGCCCAGGCGCAACAGGCGCTGGCCGAGCGGGC < 1:98774/150‑1 GCGGCACCACCGCACGCAGGCCCAGGCGCAACAGGCGCTGGCCGAGCGGGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAACGCAAGTTGCCGGCGCA > 1:24485/1‑150 GCACCACCGCACGCAGGCCCAGGCGCAACAGGCGCTGGCCGAGCGGGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAA > 1:112552/1‑130 GCACCACCGCACGCAGGCCCAGGCGCAACAGGCGCTGGCCGAGCGGGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAA < 2:112552/130‑1 ACCGCACGCAGGCCCAGGCGCAACAGGCGCTGGCCGAGCGGGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAACGCAAGTTGCCGGCGCAAGTCACCA > 1:209170/1‑150 GCAGGCCCAGGCGCAACAGGCGCTGGCCGAGCGGGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAACGCAAGTTGCCGGCGCAAGTCACCACACCGGG > 1:355117/1‑150 GGCCCAGGCGCAACAGGCGCTGGCCGAGCGGGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAACGCAAGTTGCCGGCGCAAGTCACCACACCGGGCCA < 2:24485/150‑1 GGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAACGCAAGTTGCCGGCGCAAGTCACCACACCGGGCCAGCGTCCGGCAGTGCGCCATGCACGCCGGAT < 2:209170/150‑1 GTGTGGTGACTTGCGCCGGCAACTTGCGTTTGACTGAGGCCGGTAGCAGCGGGCGCAGCACCTGGCCGCTGCGGGTCAGGGCCTTGAACAGTGCCGGGCGCGGCACCACCGCACGCAGGCCCAGGCGCAACAGGCGCTGGCCGAGCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4277120‑4276970 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAACGCAAGTTGCCGGCGCAAGTCACCACACCGGGCCAGCGTCCGGCAGTGCGCCATGCACGCCGGAT > NC_002947/4277012‑4277157 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |