New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5228684	15 (0.650)	4 (0.180)	4/244	NT	21.8%	coding (423/2391 nt)	PP_4606	ferric siderophore receptor
	?	NC_002947	= 5228712	14 (0.620)					coding (395/2391 nt)	PP_4606	ferric siderophore receptor

CATAACCGTGTCGGATGTGCCGCCGAAGTTGTTGCCCTGGGTAATGCCACTGACGTTGGCCAGGGCATCATCGAGGTTGCGCGGGGCCTGGTCGCGGATGACCTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5228534‑5228684 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccCGGCCAGCGCTTCGATCATGCGCGGCCAGGGCCCGAACCAGGACATCCCCCAGGCAATCAACGTGGTACCGGCCCAGGTCATCCGCGACCAGGCCCCGCGCAACCTCGATGATGCCCTGGCCAACGTCAGTGGCATTACCCAGGGCAAC  <  NC_002947/5228712‑5228564                                                                                                                                                                                                                                                                                                              CATAACCGTGTCGGATGTGCCGCCGAAGTTGTTGCCCTGGGTAATGCCACTGACGTTGGCCAGGGCATCATCGAGGTTGCGCGGGGCCTGGTCGCGGATGACCTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGGCC                                                                                                                                                        <  2:392841/150‑1                                                             CAGGGCATCATCGAGGTTGCGCGGGGCCTGGTCGCGGATGACCTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGGCCCCGGCCAGCGCTTCGATCATGCGCGGCCAGGGC                                                                                                                       >  1:254907/1‑123                                                             CAGGGCATCATCGAGGTTGCGCGGGGCCTGGTCGCGGATGACCTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGGCCCCGGCCAGCGCTTCGATCATGCGCGGCCAGGGC                                                                                                                       <  2:254907/123‑1                                                                                 GCGGGGCCTGGTCGCGGATGACCTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGGCCCCGGCCAGCGCTTCGATCATGCGCGGCCA                                                                                                                           <  1:327650/99‑1                                                                                 GCGGGGCCTGGTCGCGGATGACCTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGGCCCCGGCCAGCGCTTCGATCATGCGCGGCCA                                                                                                                           >  2:327650/1‑99                                                                                                                                                       CCGGCCAGCGCTTCGATCATGCGCGGCCAGGGCCCGAACCAGGACATCCCCCAGGCAATCAACGTGGTACCGGCCCAGGTCATCCGCGACCAG                                                           <  1:485886/93‑1                                                                                                                                                       CCGGCCAGCGCTTCGATCATGCGCGGCCAGGGCCCGAACCAGGACATCCCCCAGGCAATCAACGTGGTACCGGCCCAGGTCATCCGCGACCAG                                                           >  2:485886/1‑93                                                                                                                                                       CCGGCCAGCGCTTCGATCATGCGCGGCCAAGGCGCGAACCAGGACATCCCCCAGGCAATCAACGTGGTACCGGCCCAGGTCATCCGCGACCAGGCCCCGCGCAACCTCGATGATGCCCTGGCCAACGTCAGTGGCATTACCCAGGGCAAC  <  1:526219/150‑1                                                                                                                                                                                                                                                                                                              CATAACCGTGTCGGATGTGCCGCCGAAGTTGTTGCCCTGGGTAATGCCACTGACGTTGGCCAGGGCATCATCGAGGTTGCGCGGGGCCTGGTCGCGGATGACCTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5228534‑5228684 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccCGGCCAGCGCTTCGATCATGCGCGGCCAGGGCCCGAACCAGGACATCCCCCAGGCAATCAACGTGGTACCGGCCCAGGTCATCCGCGACCAGGCCCCGCGCAACCTCGATGATGCCCTGGCCAACGTCAGTGGCATTACCCAGGGCAAC  <  NC_002947/5228712‑5228564

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.