New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 525739927 (1.170)3 (0.140) 3/234 NT 11.7% coding (451/909 nt) PP_4634 alpha/beta family hydrolase
?NC_002947 = 5257429 20 (0.920)coding (421/909 nt) PP_4634 alpha/beta family hydrolase

GCTCATAACGTGGGGTACGCGTGGTCCAGTCGTGCACCACGCCGGATGGCGTGTCTTCCAGCCACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5257243‑5257399
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggttggcGCGCAGTTCGCCTACTGGCGCTACTATGCGGCCAACCAGCGCTGGCAGCTGTTCGGCAAGTGGCATGTGGTCATGCCGCTGCTGACCCGGGTATTCGGCTATTTTCCCGGCAAGCGCCTGGGGTGGCTGGAAGACACGCCATC  <  NC_002947/5257429‑5257287
                                                                                                                                                                                                                                                                                                            
GCTCATAACGTGGGGTACGCGTGGTCCAGTCGTGCACCACGCCGGATGGCGTGTCTTCCAGCCACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCT                                                                                                                                                        <  1:583653/150‑1
   CATAACGTGGGGTACGCGTGGTCCAGTCGTGCACCACGCCGGATGGCGTGTCTTCCAGCCACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGT                                                                                                                                                     <  2:494803/150‑1
                                             ctgaCGTCTCTGCCAGCCACCCCGGGGGCTGTCCGTGAAAATAGCCGAATACCCCGGTCAGCAGCGGCATGACCACATGCCACGTGCCGAACAGCTGCCATCGCTGGTTGGCGCGCAGTTCGCCTACTGGCGCTACTATGCGGCCAACCA                                                                                                           <  2:86190/146‑1
                                                GCGTGTCTTCCAGCCACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCGCGCAGTTCGCCTACTGGCGCTACTATGCGGCCAACCAGag                                                                                                        >  1:86190/1‑148
                                                  gaggCTTCCAGCAACCCCCGGGGCTGGCCCGGAAAATAGCCGGATAACCGGGTCAGCAGCGGCATGCCCACATGCCACCTGCCTAACAGCTGCCAGCGCTGGTTGGCGCGCAGTTCGCCTAATTGCGCTACTATGCGGCAAACCAGCGCT                                                                                                      <  2:47956/146‑1
                                                                                                                                                      GGTTGGCGCGCAGTTCGCCTACTGGCGCTACTATGCGGCCAACCAGCGCTGGAAGCTGTTCGTCAAGTGGCATGTGGTCATGCCGCTGCTGACCCGGGTATTCGGCTATTTTCCCGGCAAGCGCCTGGGGTGGCTGGAAGACACGCCATC  <  2:391408/150‑1
                                                                                                                                                                                                                                                                                                            
GCTCATAACGTGGGGTACGCGTGGTCCAGTCGTGCACCACGCCGGATGGCGTGTCTTCCAGCCACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5257243‑5257399
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggttggcGCGCAGTTCGCCTACTGGCGCTACTATGCGGCCAACCAGCGCTGGCAGCTGTTCGGCAAGTGGCATGTGGTCATGCCGCTGCTGACCCGGGTATTCGGCTATTTTCCCGGCAAGCGCCTGGGGTGGCTGGAAGACACGCCATC  <  NC_002947/5257429‑5257287

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.