New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 525739927 (1.170)3 (0.140) 3/234 NT 11.7% coding (451/909 nt) PP_4634 alpha/beta family hydrolase
?NC_002947 = 5257429 20 (0.920)coding (421/909 nt) PP_4634 alpha/beta family hydrolase

GATGGCGTGTCTTCCAGCCACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGTGCCAGGCCTACTGCACAACCGCCGAAACTGTGCCCCACCACGTCCACCGGCTGACCTGGAAAATGCGCTGCCGCGTGCGCCAGCATGGCTTCGAAATCCAATCGGCCC  >  NC_002947/5257287‑5257577
                                                                                                                                              |                                                                                                                                                    
gATGGCGTGTCTTCCAGCCACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGACGAACAGCTTCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCgccaacc                                                                                                                                               <  2:391408‑M2/150‑8 (MQ=255)
     cGTGTCTTCCAGCCACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCAc                                                                                                                                          >  2:143362/1‑150 (MQ=255)
           ttCCAGCCACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGAc                                                                                                                                       >  1:408597/1‑147 (MQ=255)
           ttCCAGCCACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGAc                                                                                                                                       <  2:408597/147‑1 (MQ=255)
                  cACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACAAGATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATc                                                                                                                             <  1:6551/150‑1 (MQ=255)
                   aCCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCt                                                                                                                            <  1:143362/150‑1 (MQ=255)
                                  cGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGAccc                                                                                                                                     <  1:403786/126‑1 (MQ=255)
                                  cGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGAccc                                                                                                                                     >  2:403786/1‑126 (MQ=255)
                                  cGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGTg                                                                                                             <  1:457317/150‑1 (MQ=255)
                                  cGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGTg                                                                                                             >  1:253475/1‑150 (MQ=255)
                                       aaaTGGCCGAATCGCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGTGCCAgg                                                                                                        <  2:436734/150‑1 (MQ=255)
                                             ccGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGt                                                                                                              <  1:345737/138‑1 (MQ=255)
                                             ccGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGt                                                                                                              >  2:345737/1‑138 (MQ=255)
                                             ccGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGTGCCAGGCCTACt                                                                                                  <  2:253475/150‑1 (MQ=255)
                                                                gcGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGTGCCAGGCCTACTGCACAACCGCCGAAACtgt                                                                               <  2:542165/150‑1 (MQ=255)
                                                                gcGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGGGCCAGGCCTACTGCACAACCGCCGAAACtgt                                                                               <  1:273771/150‑1 (MQ=255)
                                                                                   cTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGTGCCAGGCCTACTGCACAACCGCCGAAACTGTGCCCCACCACGTCCACCgg                                                            >  1:202789/1‑150 (MQ=255)
                                                                                                    aGCGCTGGTTTGCCGCATAGTAGCGCAATTAGGCGAACTGCGCgccaaccagcgctggcagctgttaggcaggtggcatgtgggcatgccgctgctgacccggttatccggctattttccgggccagccccgggggttgctggaagcctc                                           <  2:47956‑M2/150‑108 (MQ=255)
                                                                                                     gcgcTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGTGCCAGGCCTACTGCACAACCGCCGAAACTGTGCCCCACCAAGTCCACCGGCTGACCTGGAAAATgcgc                                          <  1:391408/150‑1 (MQ=255)
                                                                                                      ctctgGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCgccaaccagcgctggcagctgttcggcaagtggcatgtggtcatgccgctgctgacccgggtattcggctattttcccggcaagcgcctggggtggctggaagacacgc                                         >  1:86190‑M2/3‑41 (MQ=255)
                                                                                                         tGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCgccaaccagcgatggcagctgttcggcacgtggcatgtggtcatgccgctgctgaccggggtattcggctattttcacggacagcccccggggtggctggcagagacgtcag                                      <  2:86190‑M2/150‑113 (MQ=255)
                                                                                                         tGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGTGCCAGGCCTACTGCACAACCGCCGAAACTGTGCCCCACCACGTCCACCGGCTGACCTGGAAAATGCGCTGcc                                      >  1:337088/1‑150 (MQ=255)
                                                                                                                 cGCATAGTAGCGCCAGTAGGCGAACTCTTTTCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGTGCCAGGCCTACTGCACAACCGCCGAAACTGTGCCCCACCACGTCCACCGGCTGACCTGGAAAATGCGCTGCCGCGTgcgc                              >  1:324650/1‑150 (MQ=255)
                                                                                                                                  aGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGTGCCAGGCCTACTGCACAACCGCCGAAACTGTGCCCCACCACGTCCACCGGCTGACCTGGAAAATGCGCTGCCGCGTGCGCCAGCATGGCTTCGAAAt             <  2:337088/150‑1 (MQ=255)
                                                                                                                                     cGAACTGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGTGCCAGGCCTACTGCACAACCGCCGAAACTGTGCCCCACCACGTCCACCGGCTGACCTGGAAAATGCGCTGCCGCGTGCGCCAGCATGGCTTCGAAATCCa          >  2:448260/1‑150 (MQ=255)
                                                                                                                                          tGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGTGCCAGGCCTACTGCACAACCGCCGAAACTGTGCCCCACCACGTCCACCGGCTGACCTGGAAAATGCGCTGCCGCGTGCGCCAGCATGGCTTCGAAATCCAATCgg     >  1:213213/1‑150 (MQ=255)
                                                                                                                                             gcgcCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGTGCATCTTCGGCGCGATATCCGCCGAAACTGTGCCCCACCACGTCCACCGGCTGACCTGGAAAATGCGCTGCCGCGTGCGCCAGCATGGCTTCGAAATCCAATCGGccc  <  2:324650/150‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                                    
GATGGCGTGTCTTCCAGCCACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGTGCCAGGCCTACTGCACAACCGCCGAAACTGTGCCCCACCACGTCCACCGGCTGACCTGGAAAATGCGCTGCCGCGTGCGCCAGCATGGCTTCGAAATCCAATCGGCCC  >  NC_002947/5257287‑5257577

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.