New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5345732 =	30 (1.300)	4 (0.190)	4/232	NT	12.0%	coding (1082/1935 nt)	acsA‑II	acetyl‑CoA synthetase
	?	NC_002947	5345771 =	31 (1.450)					coding (1121/1935 nt)	acsA‑II	acetyl‑CoA synthetase

TCGGCTCGCCGACGCTGCCCAGCAGACGCAGGCTTTTGCGTGAGGTGCTCTGCAGTGGCGCGGAGCCCTCACGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5345806‑5345732 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctcacgcaAAAGCCTGCGTCTGCTGGGCAGCGTCGGCGAGCCGATCAACCCGGAAGCCTGGGAA  >  NC_002947/5345771‑5345826                                                                                                                                     TCGGCTCGCCGACGCTGCCCAGCAGACGCAGGCTTTTGCGTGAGGTGCTCTGCAGTGGCGCGGAGCC                                                                  <  1:80896/67‑1 TCGGCTCGCCGACGCTGCCCAGCAGACGCAGGCTTTTGCGTGAGGTGCTCTGCAGTGGCGCGGAGCC                                                                  >  2:80896/1‑67                                        GTGAGGTGCTCTGCAGTGGCGCGGAGCCCTCACGCAAAAGCCTGCGTCTGCTGGGCAGCGTCGGCGAGCCGA                      <  1:339935/72‑1                                        GTGAGGTGCTCTGCAGTGGCGCGGAGCCCTCACGCAAAAGCCTGCGTCTGCTGGGCAGCGTCGGCGAGCCGA                      >  2:339935/1‑72                                         TGAGGTGCTCTGCAGTGGCGCGGAGCCCTCACGCAAAAGCCTGCGTCTGCTGGGCAGCGTCGGCGAGCCGATCAACCCGGAAGCCTGGGAA  >  1:424552/1‑91                                         TGAGGTGCTCTGCAGTGGCGCGGAGCCCTCACGCAAAAGCCTGCGTCTGCTGGGCAGCGTCGGCGAGCCGATCAACCCGGAAGCCTGGGAA  <  2:424552/91‑1                                                                                                                                     TCGGCTCGCCGACGCTGCCCAGCAGACGCAGGCTTTTGCGTGAGGTGCTCTGCAGTGGCGCGGAGCCCTCACGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5345806‑5345732 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctcacgcaAAAGCCTGCGTCTGCTGGGCAGCGTCGGCGAGCCGATCAACCCGGAAGCCTGGGAA  >  NC_002947/5345771‑5345826

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.