New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 673262 = | 32 (1.380) | 3 (0.140) | 3/238 | NT | 9.2% | coding (261/777 nt) | PP_0574 | LuxR family transcriptional regulator |
? | NC_002947 | 673328 = | 29 (1.320) | coding (195/777 nt) | PP_0574 | LuxR family transcriptional regulator |
AGCCCTCTCAACCGACGAAGCCATCGAGCACTATGTGGCAGACCCGACCATCGGCTTGCTCATCTGTGACCTGCACATGCCCGATCGGGATGGCATCGAGCTGGTGCGCGCCTTGAAGGAAATCAACGGCAGCCAGCGCACGTTCGAAGCCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/673415‑673262 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccatcCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCGGTTGAGAGGGCTGTAACGCAGGCATAGCCCTTGGTTTCGAGGAATTCACTCAGCTGTTCGACAATGACCGGT > NC_002947/673328‑673475 AGCCCTCTCAACCGACGAAGCCATCGAGCACTATGTGGCAGACCCGACCATCGGCTTGCTCATCTGTGACCTGCACATGCCCGATCGGGATGGCATCGAGCTGGTGCGCGCCTTGAAGGAAATCAACGGCAGCCAGCGCACGTTCGAAGC > 1:277906/1‑150 CTCTCAACCGACGAAGCCATCGAGCACTATGTGGCAGACCCGACCATCGGCTTGCTCATCTGTGACCTGCACATGCCCGATCGGGATGGCATCGAGCTGGTGCGCGCCTTGAAGGAAATCAACGGCAGCCAGCGCACGTTCGAAGCCATC < 2:277906/150‑1 CTGCACATGCCCGATCGGGATGGCATCGAGCTGGTGCGCGCCTTGAAGGAAATCAACGGCAGCCAGCGCACGTTCGAAGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGAT > 2:358246/1‑150 CCGATCGGGATGGCATCGAGCTGGTGCGCGCCTTGAAGGAAATCAACGGCAGCCAGCGCACGTTCGAAGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCG > 2:264172/1‑150 TGGTGCGCGCCTTGAAGGAAATCAACGGCAGCCAGCGCACGTTCGAAGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCGGTTGAGAGGGCTGTAACGCAG < 1:358246/150‑1 ATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCGGTTGAGAGGGCTGTAACGCAGGCATAGCCCTTGGTTTCGAGGAATTCACTCAGCTGTTCGACAATGACCGG > 1:203358/1‑150 ATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCGGTTGAGAGGGCTGTAACGCAGGCATAGCCCTTGGTTTCGAGGAATTCACTCAGCTGTTCGACAATGACCGG > 1:317460/1‑150 TCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCGGTTGAGAGGGCTGTAACGCAGGCATAGCCCTTGGTTTCGAGGAATTCACTCAGCTGTTCGACAATGACCGGT < 1:47396/150‑1 TCCCGATCGGGCATGTGCAGGTAACAGATGAGCAAGCCGATGGGCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCGGTTGAGAGGGCTGTAACGCAGGCATAGCCCTTGGTTTCGAGGAATTCACTCAGCTGTTCGACAATGACCaac < 2:127600/150‑4 AGCCCTCTCAACCGACGAAGCCATCGAGCACTATGTGGCAGACCCGACCATCGGCTTGCTCATCTGTGACCTGCACATGCCCGATCGGGATGGCATCGAGCTGGTGCGCGCCTTGAAGGAAATCAACGGCAGCCAGCGCACGTTCGAAGCCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/673415‑673262 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccatcCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCGGTTGAGAGGGCTGTAACGCAGGCATAGCCCTTGGTTTCGAGGAATTCACTCAGCTGTTCGACAATGACCGGT > NC_002947/673328‑673475 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |