New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 147386431 (1.340)3 (0.140) 3/234 NT 10.2% coding (364/1317 nt) algD GDP‑mannose 6‑dehydrogenase
?NC_002947 = 1473895 24 (1.110)coding (333/1317 nt) algD GDP‑mannose 6‑dehydrogenase

CGGTGGCTGGTCGTAGTCCTTGATCGCGGTGCTTTCACGCAGGAATTCCGGGTTGACCGCCACGCCGAAGTCGACGCCGGCCTTCTTGCCCGAGCAGTCTTCGAGGATCGGGATGACCACGTTCTTGACGGTGCCAGGCAGTACGGTGCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1473712‑1473864
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgctgcgTGACACCACCCGCCGTCACACCATCGTGGTGCGCAGCACCGTACTGCCTG  <  NC_002947/1473895‑1473846
                                                                                                                                                                                                           
CGGTTGCTGGTCGTAGTCCTTGATCGCGGTGCTTTCACGCAGGAATTCCGGGTTGACCGCCACGCCGAAGTCGACGCCGGCCTTCTTGCCCGAGCAGTCTTCGAGGATCGTGATGACCACGTTCTTGACGGTGCCAGGCAGTACGGTGCT                                                       <  1:207228/150‑1
   TGGCTGGTCGTAGTCCTTGATCGCGGTGCTTTCACGCAGGAATTCCGGGTTGACCGCCACGCCGAAGTCGACGCCGGCCTTCTTGCCCGAGCAGTCTTCGAGGATCGGGATGACCACGTTCTTGACGGTGCCAGGCAGTACGGTGCTGCG                                                    <  2:301262/150‑1
                                    ACGCAGGAATTCCGGGTTGACCGCCACGCCGAAGTCGACGCCGGCCTTCTTGCCCGAGCAGTCTTCGAGGATCGGGATGACCACGTTCTTGACGGTGCCAGGCAGTACGGTGCTGCGTGACACCACCCGCCGTCACACCATCGTGGTGCG                   >  2:54731/1‑150
                                         GGAATTCCGGGTTGACCGCCACGCCGAAGTCGACGCCGTCCTGCTTGCTCGAGGAGTCTTCGAGGATCGGGATGACCACGTTCTTGACGGTGCCAGGCAGTACGGTGCTGCGTGACATCACCCGCCGTCACACCATCGTGGTGCGCAGCA              <  2:224145/150‑1
                                          GAATTCCGGGTTGACCGCCACGCCGAAGTCGACGCCGGCCTTCTTGCCCGAGCAGTCTTCGAGGATCGGGATGACCACGTTCTTGACGGTGCCAGGCAGTACGGTGCTGCGTGACACCACCCGCCGTCACACCATCGTGGTGCGCAGCAC             <  1:54731/150‑1
                                                                                                                                                 GTGCTGCGTGACACCACCCGCCGTCACACCATCGTGGTGCGCAGCACCGTACTGCCTG  <  1:194826/58‑1
                                                                                                                                                 GTGCTGCGTGACACCACCCGCCGTCACACCATCGTGGTGCGCAGCACCGTACTGCCTG  >  2:194826/1‑58
                                                                                                                                                                                                           
CGGTGGCTGGTCGTAGTCCTTGATCGCGGTGCTTTCACGCAGGAATTCCGGGTTGACCGCCACGCCGAAGTCGACGCCGGCCTTCTTGCCCGAGCAGTCTTCGAGGATCGGGATGACCACGTTCTTGACGGTGCCAGGCAGTACGGTGCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1473712‑1473864
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgctgcgTGACACCACCCGCCGTCACACCATCGTGGTGCGCAGCACCGTACTGCCTG  <  NC_002947/1473895‑1473846

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.