New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1473864 | 31 (1.340) | 3 (0.140) | 3/234 | NT | 10.2% | coding (364/1317 nt) | algD | GDP‑mannose 6‑dehydrogenase |
? | NC_002947 | = 1473895 | 24 (1.110) | coding (333/1317 nt) | algD | GDP‑mannose 6‑dehydrogenase |
CGGTGGCTGGTCGTAGTCCTTGATCGCGGTGCTTTCACGCAGGAATTCCGGGTTGACCGCCACGCCGAAGTCGACGCCGGCCTTCTTGCCCGAGCAGTCTTCGAGGATCGGGATGACCACGTTCTTGACGGTGCCAGGCAGTACGGTGCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1473712‑1473864 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgctgcgTGACACCACCCGCCGTCACACCATCGTGGTGCGCAGCACCGTACTGCCTG < NC_002947/1473895‑1473846 CGGTTGCTGGTCGTAGTCCTTGATCGCGGTGCTTTCACGCAGGAATTCCGGGTTGACCGCCACGCCGAAGTCGACGCCGGCCTTCTTGCCCGAGCAGTCTTCGAGGATCGTGATGACCACGTTCTTGACGGTGCCAGGCAGTACGGTGCT < 1:207228/150‑1 TGGCTGGTCGTAGTCCTTGATCGCGGTGCTTTCACGCAGGAATTCCGGGTTGACCGCCACGCCGAAGTCGACGCCGGCCTTCTTGCCCGAGCAGTCTTCGAGGATCGGGATGACCACGTTCTTGACGGTGCCAGGCAGTACGGTGCTGCG < 2:301262/150‑1 ACGCAGGAATTCCGGGTTGACCGCCACGCCGAAGTCGACGCCGGCCTTCTTGCCCGAGCAGTCTTCGAGGATCGGGATGACCACGTTCTTGACGGTGCCAGGCAGTACGGTGCTGCGTGACACCACCCGCCGTCACACCATCGTGGTGCG > 2:54731/1‑150 GGAATTCCGGGTTGACCGCCACGCCGAAGTCGACGCCGTCCTGCTTGCTCGAGGAGTCTTCGAGGATCGGGATGACCACGTTCTTGACGGTGCCAGGCAGTACGGTGCTGCGTGACATCACCCGCCGTCACACCATCGTGGTGCGCAGCA < 2:224145/150‑1 GAATTCCGGGTTGACCGCCACGCCGAAGTCGACGCCGGCCTTCTTGCCCGAGCAGTCTTCGAGGATCGGGATGACCACGTTCTTGACGGTGCCAGGCAGTACGGTGCTGCGTGACACCACCCGCCGTCACACCATCGTGGTGCGCAGCAC < 1:54731/150‑1 GTGCTGCGTGACACCACCCGCCGTCACACCATCGTGGTGCGCAGCACCGTACTGCCTG < 1:194826/58‑1 GTGCTGCGTGACACCACCCGCCGTCACACCATCGTGGTGCGCAGCACCGTACTGCCTG > 2:194826/1‑58 CGGTGGCTGGTCGTAGTCCTTGATCGCGGTGCTTTCACGCAGGAATTCCGGGTTGACCGCCACGCCGAAGTCGACGCCGGCCTTCTTGCCCGAGCAGTCTTCGAGGATCGGGATGACCACGTTCTTGACGGTGCCAGGCAGTACGGTGCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1473712‑1473864 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgctgcgTGACACCACCCGCCGTCACACCATCGTGGTGCGCAGCACCGTACTGCCTG < NC_002947/1473895‑1473846 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |