New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1581381 =	23 (1.000)	3 (0.140)	4/240	NT	12.5%	coding (58/3153 nt)	ttgB	efflux pump membrane protein TtgB
	?	NC_002947	1581399 =	20 (0.900)					coding (40/3153 nt)	ttgB	efflux pump membrane protein TtgB

TCGAGGTGAAGGTCAGCGATGCCACCAACGTCAAGAAGCCGGCCGGTCCTGATCAGGCCAACGCGGCGAAAGCAGACGCCAAAGCGGAGTAAACCATGTCGAAGTTCTTTATCGATCGCCCGATCTTCGCCTGGGTGATCGCCTTGGTGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1581533‑1581381 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcaCCCAGGCGAAGATCGGGCGATCGATAAAGAACTTCGACATGGTTTACTCCGCTTTGGCGTCTGCTTTCGCCGCGTTGGCCTGATCAGGACCGGCCGGCTTCTTGACGTTGGTGGCATCGCTGACCTTCACC  >  NC_002947/1581399‑1581529                                                                                                                                                                                                                                                                                              gCGAGGTGAAGGTCAGCGATGCCACCAACGTCAAGAAGCCGGCCGGTCCTGATCAGGCCAACGCGGCGAAAGCAGACGCCAAAGCGGAGTAAACCATGTCGAAGTTCTTTATCGATCGCCCGATCTTCGCCTGGGTGATCGCCTTGGTGA                                                                                                                                        <  2:215919/149‑1         AAGGTCAGCGATGCCACCAACGTCAAGAAGCCGGCCGGTCCTGATCAGGCCAACGCGGCGAAAGCAGACGCCAAAGCGGAGTAAACCATGTCGAAGTTCTTTATCGATCGCCCGATCTTCGCCTGGGTGATCACCAAGGCGATCACCCAG                                                                                                                                <  1:59247/150‑1                                                                        GCAGACGCCAAAGCGGAGTAAACCATGTCGAAGTTCTTTATCGATCGCCCGATCTTCGCCTGGGTGATCACCAAGGCGATCACCCAG                                                                                                                                >  1:404904/1‑87                                                                        GCAGACGCCAAAGCGGAGTAAACCATGTCGAAGTTCTTTATCGATCGCCCGATCTTCGCCTGGGTGATCACCAAGGCGATCACCCAG                                                                                                                                <  2:404904/87‑1                                                                                                                                       GTGATCGCCTTGGTGATCACCCAGGCGAAGATCGGGCGATCGATAAAGAACTTCGACATGGTTTACTCCGCTTTGGCGTCTGCTTTCGCCGCGTTGGCCTGATCAGGACCGGCCGGCTTCTTGACGTTGGTGGCATCGCTGACCTTCACC  >  2:543964/1‑150                                                                                                                                       GTGATCGCCTTGGTGATCACCCAGGCGAAGATCGGGCGATCGATAAAGAACTTCGACATGGTTTAC                                                                                      <  1:281374/66‑1                                                                                                                                       GTGATCGCCTTGGTGATCACCCAGGCGAAGATCGGGCGATCGATAAAGAACTTCGACATGGTTTAC                                                                                      >  2:281374/1‑66                                                                                                                                                                                                                                                                                              TCGAGGTGAAGGTCAGCGATGCCACCAACGTCAAGAAGCCGGCCGGTCCTGATCAGGCCAACGCGGCGAAAGCAGACGCCAAAGCGGAGTAAACCATGTCGAAGTTCTTTATCGATCGCCCGATCTTCGCCTGGGTGATCGCCTTGGTGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1581533‑1581381 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcaCCCAGGCGAAGATCGGGCGATCGATAAAGAACTTCGACATGGTTTACTCCGCTTTGGCGTCTGCTTTCGCCGCGTTGGCCTGATCAGGACCGGCCGGCTTCTTGACGTTGGTGGCATCGCTGACCTTCACC  >  NC_002947/1581399‑1581529

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.