New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1745822 =	24 (1.040)	5 (0.230)	5/240	NT	17.5%	intergenic (‑20/+299)	PP_1543/PP_1544	hypothetical protein/hypothetical protein
	?	NC_002947	1745847 =	24 (1.080)					intergenic (‑45/+274)	PP_1543/PP_1544	hypothetical protein/hypothetical protein

TCCGAAGTGCTCTTCTTAACATCACTGTCGCGGTGATACCAAGCCATACATACCTCCTTCTGTATTGAGCCCCAACTAAATCACGGCAGGCAAATGGCCACAATGCTGTGATTTTAAACAGCCACCATGCCG‑CATCCG‑GCCACGGAGGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1745974‑1745822 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcATGGTGGCTGTTTAAAATCACAGCATTGTGGCCATTTGCCTGCCGTGATTTAGTTGGGGCTCAATACAGAAGGAGGTATGTATGGCTTGGTATCACCGCGACAGTGATGTTAAGAAGAGCAC  >  NC_002947/1745847‑1745968                                                                                                                                                                                                                                                                                       TCCGAAGTGCTCTTCTTAACATCACTGTCGCGGTGATACCAAGCCATACATACCTCCTTCTGTATTGAGCCCCAACTAAATCACGGCAGGCAAATGGCCACAATGCTGTGATTTTAAACAGCCACCATGCCG‑CATCCG‑GCCACGGAGGGC                                                                                                                               >  1:549488/1‑150    GAAGTGCTCTTCTTAACATCACTGTCGCGGTGATACCAAGCCATACATACCTCCTTCTGTATTGAGCCCCAACTAAATCACGGCAGGCAAATGGCCACAATGCTGTGATTTTAAACAGCCACCATGCCG‑CATCCG‑GCCACGGAGGGCGGC                                                                                                                            >  2:561784/1‑150                          TGTCGCGGTGATACCAAGCCATACATACCTCCTTCTGTATTGAGCCCCAACTAAATCACGGCAGGCAAATGGCCACAATGCTGTGATTTTAAACAGCCACCATGCCGCCCTCCGTGGC‑CGGA‑TGCGGCATGGTGGCTGTTTAAAAT                                                                                                          <  1:322825/146‑1                          TGTCGCGGTGATACCAAGCCATACATACCTCCTTCTGTATTGAGCCCCAACTAAATCACGGCAGGCAAATGGCCACAATGCTGTGATTTTAAACAGCCACCATGCCGCCCTCCGTGGC‑CGGA‑TGCGGCATGGTGGCTGTTTAAAAT                                                                                                          >  2:322825/1‑146                                                                                                                              CATGCCG‑CATCCG‑GCCACGGAGGGCGGCATGGTGGCTGTTTAAAATCACAGCATTGTGGCCATTTGCCTGCAGTGATTTAGTTGGGGCTCAATACAGAAGGAGGTATGTATGGCTTGGTATCACCGCGACAGTGATGTTAAGAAGAGCAC  >  1:18362/1‑150                                                                                                                               ATGCCG‑CATCCG‑GCCACGGAGGGCGGCATGGTGGCTGTTTAAAATCACAGCATTGTGGCCATTT                                                                                       <  1:384403/64‑1                                                                                                                               ATGCCG‑CATCCG‑GCCACGGAGGGCGGCATGGTGGCTGTTTAAAATCACAGCATTGTGGCCATTT                                                                                       >  2:384403/1‑64                                                                                                                                                                                                                                                                                       TCCGAAGTGCTCTTCTTAACATCACTGTCGCGGTGATACCAAGCCATACATACCTCCTTCTGTATTGAGCCCCAACTAAATCACGGCAGGCAAATGGCCACAATGCTGTGATTTTAAACAGCCACCATGCCG‑CATCCG‑GCCACGGAGGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1745974‑1745822 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcATGGTGGCTGTTTAAAATCACAGCATTGTGGCCATTTGCCTGCCGTGATTTAGTTGGGGCTCAATACAGAAGGAGGTATGTATGGCTTGGTATCACCGCGACAGTGATGTTAAGAAGAGCAC  >  NC_002947/1745847‑1745968

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.