New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1968086 | 14 (0.610) | 4 (0.190) | 4/224 | NT | 22.5% | intergenic (‑54/+104) | yciK/gph | putative oxidoreductase/phosphoglycolate phosphatase |
? | NC_002947 | = 1968145 | 15 (0.720) | intergenic (‑113/+45) | yciK/gph | putative oxidoreductase/phosphoglycolate phosphatase |
CCACGGCCGGCACCGGTAACCAGGATGACCCGGCCTTGCAGCAGGTCGGGGCGGGCGGTGTAGTCGAACATGGTTCTGTCCTTCGAGTTCGTGTGGGCGGCCTGGGCCTATCGTAGGAGCGGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1967962‑1968086 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggagcgggttCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCCGCTCCTACGATAGGCCCAGGCCGCCCACACGAACTCGAAGGACAGAACCATGTTCGACTACACCGCCCGCCCCGACCTG < NC_002947/1968145‑1968003 CCACGGCCGGCACCGGTAACCAGGATGACCCGGCCTTGCAGCAGGTCGGGGCGGGCGGTGTAGTCGAACATGGTTCTGTCCTTCGAGTTCGTGTGGGCGGCCTGGGCCTATCGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGAC > 2:558660/1‑150 GCGGGCGGTGTAGTCGAACATGGTTCTGTCCTTCGAGTTCGTGTGGGCGGCCTGGGCCTATCGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGG > 1:232376/1‑131 GCGGGCGGTGTAGTCGAACATGGTTCTGTCCTTCGAGTTCGTGTGGGCGGCCTGGGCCTATCGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGG < 2:232376/131‑1 GGGCGGTGTAGTCGAACATGGTTCTGTCCTTCGAGTTCGTGTGGGCGGCCTGGGCCTATCGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCCGCTCCTACGATAG < 1:558660/150‑1 GCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCCGCTCCTACGATAGGCCCAGGCCGCCCACACGAACTCGAAGGACAGAACCATGTTCGACTACACCGCCCGCCCCGGCCTt > 2:470201/1‑149 GTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCCGCTCCTA > 1:584268/1‑74 GTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCCGCTCCTA < 2:584268/74‑1 CCACGGCCGGCACCGGTAACCAGGATGACCCGGCCTTGCAGCAGGTCGGGGCGGGCGGTGTAGTCGAACATGGTTCTGTCCTTCGAGTTCGTGTGGGCGGCCTGGGCCTATCGTAGGAGCGGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1967962‑1968086 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggagcgggttCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCCGCTCCTACGATAGGCCCAGGCCGCCCACACGAACTCGAAGGACAGAACCATGTTCGACTACACCGCCCGCCCCGACCTG < NC_002947/1968145‑1968003 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |