New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2792897	10 (0.430)	4 (0.180)	4/238	NT	29.1%	coding (184/240 nt)	PP_5524	hypothetical protein
	?	NC_002947	= 2792919	10 (0.450)					coding (206/240 nt)	PP_5524	hypothetical protein

TGGCTTTGGCCCTGTTCACCCTGGCAGGCTGCGACCAGGCCGAGAAATCCGCGCAGCAGATGCTCGATCAGGCCGCGCAGTCGGCCAAGCAAGCCATCGACGACACCAACAAGGCTGCCCAGCAGGCGCTGAGCGAAGCCATCGGCAGCGAAGGGCAGAAGCCCAAGGATGCCGAGAAGAAAGAAGAAATCCAGGAAATCTGACCCCAACCGCTGCTGCAGGATTTGAACAATGGAATATTTGCTGGAACTCGCCGCTAGCCCTACCGCCTGGGTTGCCCTGG  >  NC_002947/2792751‑2793033                                                                                                                                                   |                                                                                                                                         tGGCTTTGGCCCTGTTCACCCTGGCAGGCTGCGACCAGGCCGAGAAATCCGCGCAGCAGATGCTCGATCAGGCCGCGCAGTCGGCCAAGCAAGCCATCGACGACACCAACAAGGCTGCCCAGCAGGCGCTGAGCGAAGCCATCGGCAGCg                                                                                                                                       >  1:250905/1‑150 (MQ=255)   gCTTTGGCCCTGTTCACCCTGGCAGGCTGCGACCAGGCCGAGAAATCCGCGCAGCAGATGCTCGATCAGGCCGCGCAGTCGGCCAAGCAAGCCATCGACGACACCAACAAGGCTGCCCAGCAGGCGCTGAGCGAAGCCATCGGCAGCGaa                                                                                                                                     <  2:243664/150‑1 (MQ=255)         gCCCTGTTCACCCTGGCAGGCTGCGACCAGGCCGAGAAATCCGCGCAGCAGATGCTCGATCAGGCCGCGCAGTCGGCCAAGCAAGCCATCGACGCCACCAACAAGGCTGCCCAGCAGGCGCTGAGCGAAGCCATCGGCAGCGAAGGGCAg                                                                                                                               >  2:215336/1‑150 (MQ=255)                  ccccTGGCAGGCTGCGCCCAGGCCGAGAAATCCGCGCAGCAGATGCTCGATCAGGCCGCGCAGTCGGCCAAGCAAGCCATCGACGACACCAACAAGCCTGCCCAGCCGGCGCTGAGCGAAGCCATCGGCAGCGAAGGGCAGAAGCCCAAg                                                                                                                      <  1:148368/149‑1 (MQ=255)                  aCCCTGGCAGGCTGCGACCAGGCCGAGAAATCCGCGCAGCAGATGCTCGATCAGGCCGCGCAGTCGGCCAAGCAAGCCATCGACGACACCAACAAGGCTGCCCAGCAGGCGCTGAGCGAAGCCATCGGCAGCGAAGGGCAGAAGCCCAAg                                                                                                                      <  2:450348/150‑1 (MQ=255)                    ccTGGCAGGCTGCGACCAGGCCGAGAAATCCGCGCAGCAGATGCTCGATCAGGCCGCGCAGTCGGCCAAGCAAGCCATCGACGACACCAACAAGGCTGCCCAGCAGGCGCTGAGCGAAGCCATCGGCAGCGAAGGGCAGAAGCCCAAGGa                                                                                                                    >  1:353586/1‑150 (MQ=255)                               gCGACCAGGCCGAGAAATCCGCGCAGCAGATGCTCGATCAGGCCGCGCAGTCGGCCAAGCAAGCCATCGACGACACCAACAAGGCTGCCCAGCAGGCGCTGAGCGAAGCCATCGGCAGCGAAGGGCAGAAGCCCAAGGATGCCGagaaga                                                                                                         <  1:517725/150‑1 (MQ=255)                                                          agATGCTCGATCAGGCCGCGCAGTCGGCCAAGCAAGCCATCGACGACACCAACAAGGCTGCCCAGCAGGCGCTGAGCGAAGCCATCGGCAtccttgggcttctgcccttcgctgccga                                                                                                              >  1:91375‑M1/1‑90 (MQ=255)                                                          agATGCTCGATCAGGCCGCGCAGTCGGCCAAGCAAGCCATCGACGACACCAACAAGGCTGCCCAGCAGGCGCTGAGCGAAGCCATCGGCAtccttgggcttctgcccttcgctgccga                                                                                                              <  2:91375‑M1/118‑29 (MQ=255)                                                                        gCCGCGCAGTCGGCCAAGCAAGCCATCGACGACACCAACAAGGCTGCCCAGCAGGCGCTGAGCGAAGCCATCGGCAGCGAAGGGCAGAAGCCCAAGGATGCCGAGAAGAAAGAAGAAATCCAGGAAATCTGACCCCAACCGCTGCTGCAg                                                                >  1:268160/1‑150 (MQ=255)                                                                                                aTCGACGACACCAACAAGGCTGCCCAGCAGGCGCTGAGCGAAGCCATCGGCAtccttgggcttctgcccttcgctgccgat                                                                                                             >  1:115868‑M1/1‑52 (MQ=255)                                                                                                aTCGACGACACCAACAAGGCTGCCCAGCAGGCGCTGAGCGAAGCCATCGGCAtccttgggcttctgcccttcgctgccgat                                                                                                             <  2:115868‑M1/81‑30 (MQ=255)                                                                                                            aacaaGGCTGCCCAGCAGGCGCTGAGCGAAGCCATCGGCAGCGAAGGGCAGAAGCCCAAGGATGCCGAGAAGAAAGAAGAAATCCAGGAAATCTGACCCCAACCGCTGCTGCAGGATTTGAACAATGGAATATTTGCTGGAACTcgtcgc                            >  1:381212/1‑150 (MQ=255)                                                                                                               aaGGCTGCCCAGCAGGCGCTGAGCGAAGCCATCGGCAGCGAAGGGCAGAAGCCCAAGGATGCCGAGAAGAAAGAAGAAATCCAGGAAATCTGACCCCAACCGCTGCTGCAGGATTTGAACAATGGAATATTTGCTGGAACTCGCCGCTAg                         <  1:419419/150‑1 (MQ=255)                                                                                                                           cagGCGCTGAGCGAAGCCATCGGCAGCGAAGGGCAGAAGCCCAAGGATGCCGAGAAGAAAGAAGAAATCCAGGAAATCTGACCCCAACCGCTGCTGCAGGATTTGAACAATGGAATATTTGCTGGAACTCGCCGCTAGCCCTACCGCCTg             <  2:415241/150‑1 (MQ=255)                                                                                                                                      cGAAGCCATCGGCAGCGAAGGGCAGAAGCCCAAGGATGCCGAGAAGAAAGAAGAAATCCAGGAAATCTGACCCCAACCGCTGCTGCAGGATTTGAACAATGGAATATTTGCTGGAACTCGCCGCTAGCCCTACCGCCTGGGTTGCCCTgg  <  2:328028/150‑1 (MQ=255)                                                                                                                                             aTCGGCAGCGAAGGGCAGAAGCCCAAGGAtgccgatggcttcgctcagcgcctgctgggcagccttgttggtgtcgtcgat                                                                <  2:115868‑M2/81‑53 (MQ=255)                                                                                                                                             aTCGGCAGCGAAGGGCAGAAGCCCAAGGAtgccgatggcttcgctcagcgcctgctgggcagccttgttggtgtcgtcgat                                                                >  1:115868‑M2/1‑29 (MQ=255)                                                                                                                                              tCGGCAGCGAAGGGCAGAAGCCCAAGGAtgccgatggcttcgctcagcgcctgctgggcagccttgttggtgtcgtcgatggcttgcttggccgactgcgcggcctgatcgagcatct                          <  2:91375‑M2/118‑91 (MQ=255)                                                                                                                                              tCGGCAGCGAAGGGCAGAAGCCCAAGGAtgccgatggcttcgctcagcgcctgctgggcagccttgttggtgtcgtcgatggcttgcttggccgactgcgcggcctgatcgagcatct                          >  1:91375‑M2/1‑28 (MQ=255)                                                                                                                                                   |                                                                                                                                         TGGCTTTGGCCCTGTTCACCCTGGCAGGCTGCGACCAGGCCGAGAAATCCGCGCAGCAGATGCTCGATCAGGCCGCGCAGTCGGCCAAGCAAGCCATCGACGACACCAACAAGGCTGCCCAGCAGGCGCTGAGCGAAGCCATCGGCAGCGAAGGGCAGAAGCCCAAGGATGCCGAGAAGAAAGAAGAAATCCAGGAAATCTGACCCCAACCGCTGCTGCAGGATTTGAACAATGGAATATTTGCTGGAACTCGCCGCTAGCCCTACCGCCTGGGTTGCCCTGG  >  NC_002947/2792751‑2793033

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.