New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4667658 = | 38 (1.640) | 4 (0.180) | 4/242 | NT | 10.7% | coding (1378/1854 nt) | nuoL | NADH‑quinone oxidoreductase subunit L |
? | NC_002947 | 4667708 = | 30 (1.340) | coding (1428/1854 nt) | nuoL | NADH‑quinone oxidoreductase subunit L |
CAGCGGCAACACCGGCCTGCTGTATGCCGGCCTGGTAGGCGCGTTCATGACCTCGCTGTACACCTTCCGCCTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCG > NC_002947/4667510‑4667790 | gacggcgctgacgaagcggcgcttgcccaggaacagcagggcggccatcaggataccggcgatggcgatggcacccgaggtgatctccagcgcgtgcttggcttcgccaccggcatggccggcgctttccggcagcacaccggccagcgg < 1:354128‑M1/2‑1 (MQ=255) gCGGCAACACCGGCCTGCTGTATGCCGGCCTGGTAGGCGCGTTCATGACCTCGCTGTACACCTTCCGCCTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCg > 2:566845/1‑150 (MQ=255) gCAACACCGGCCTGCTGTATGCCGGCCTGGTAGGCGCGTTCATGACCTCGCTGTACACCTTCCGCCTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGc < 2:124103/150‑1 (MQ=255) cacCGGCCTGCTGTATGCCGGCCTGGTAGGCGCGTTCATGACCTCGCTGTACACCTTCCGCCTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGAt > 1:108963/1‑150 (MQ=255) cGGCCTGCTGTATGCCGGCCTGGTAGGCGCGTTCATGACCTCGCTGTACACCTTCCGCCTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGt > 2:406229/1‑150 (MQ=255) cccaggaacagcagggcggccagcaggataccggcgatggcgatggcacccgaggtgatctccagcgcgtgcttggcttcgccaccggcatggccggcgctttccggcagcacaccggccagcGGCGTGCTGATCGTGCTGTCGACTTtc < 2:33549‑M1/27‑1 (MQ=255) cGGCCTGGTAGGCGCGTTCATGACCTCGCTGTACACCTTCCGCCGGATCTTCATCGCCTTCCACGGCGAAGCCAAGACGGAAGCCCAAGTTGGCTACAGCATCAGCCACTGGCTGAAGCTGGGCGTGCTGAACGTACTATCCGCTTtcgt > 2:60406/1‑150 (MQ=255) ggCCAGGTAGTCGCGTTCATGACCTCTCTGTACACCTTCCGCCTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTtcgtc < 2:496853/150‑1 (MQ=255) gCCTGGTAGGCGCGTTCATGACCTCGCTGTACACCTTCCGCCTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTtcgtcg > 2:342541/1‑150 (MQ=255) ggTAGGCGCGTTCATGACCTCGCTGTACACCTTCCGCCTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGgcgc < 1:566845/150‑1 (MQ=255) gcgcGTTCATGACCTCGCTGTACACCTTCCGCCTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGa > 2:520615/1‑150 (MQ=255) cgcgTTCATGACCTCGCTGTACACCTTCCGCCTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGAt > 1:336365/1‑150 (MQ=255) cagcaggataccggcgatggcgatggcacccgaggtgatctccagcgcgtgcttggcttcgccaccggcatggccggcgctttccggcagcacaccggccagcGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCAcccc > 1:33549‑M1/104‑150 (MQ=255) tGACCTCGCTGTACACCTTCCGCCTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCccgc < 1:284180/150‑1 (MQ=255) cTCGCTGTACACCTTCCGCCTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCt < 1:549233/150‑1 (MQ=255) tCGCTGTACACCTTCCGCCTGATCTTCATCGCCTTCCACGGCGAAGCCACGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGAGCGTGATGGTCGTGATGTCGACGTTCCTCGTCGCCTGGATCACCCCGCCGCTg < 1:539429/150‑1 (MQ=255) cacCTTCCGCCTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTtcgtc < 2:453543/118‑1 (MQ=255) cacCTTCCGCCTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTtcgtc > 1:453543/1‑118 (MQ=255) cTTCCGCCTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGtgct < 2:336365/150‑1 (MQ=255) cGCCTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCg < 1:560702/150‑1 (MQ=255) tGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGaaa < 1:130945/150‑1 (MQ=255) tGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGaaa < 1:406229/150‑1 (MQ=255) cATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCgg > 1:339338/1‑150 (MQ=255) aTCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGc > 1:298463/1‑150 (MQ=255) cagcgcgtgcttggcttcgccaccggcatggccggcgctttccggcagcacaccggccagcGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGAt < 2:613321‑M1/41‑1 (MQ=255) cagcgcgtgcttggcttcgccaccggcatggccggcgctttccggcagcacaccggccagcGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGAt > 1:613321‑M1/62‑102 (MQ=255) aCGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTg < 1:342541/150‑1 (MQ=255) gCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGcc < 2:339338/150‑1 (MQ=255) cAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCaa > 2:595585/1‑150 (MQ=255) aaGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGAt < 2:372867/89‑1 (MQ=255) aaGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGAt > 1:372867/1‑89 (MQ=255) aGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGAGTTTCGTCGGCGCATGGATCACCCCACCACTGGCCGGTGTGCTGCCGGAAAGAGCTGGCCATGCCGGTTGAGAAGGCAAgg > 1:28841/1‑149 (MQ=255) gCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCt > 1:591178/1‑150 (MQ=255) ccACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTc > 1:399901/1‑150 (MQ=255) cACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCg > 2:354128/1‑150 (MQ=255) cATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTgc > 2:174539/1‑150 (MQ=255) aTCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGcc > 1:51081/1‑99 (MQ=255) aTCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGcc < 2:51081/99‑1 (MQ=255) gCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTgccatcg > 1:223231/1‑150 (MQ=255) gCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTgccatcg < 1:60406/150‑1 (MQ=255) gCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGga < 1:458541/123‑1 (MQ=255) gCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGga > 2:458541/1‑123 (MQ=255) tGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCaa < 2:189286/109‑1 (MQ=255) tGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCaa > 1:189286/1‑109 (MQ=255) | CAGCGGCAACACCGGCCTGCTGTATGCCGGCCTGGTAGGCGCGTTCATGACCTCGCTGTACACCTTCCGCCTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCG > NC_002947/4667510‑4667790 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |