New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4870735	32 (1.380)	5 (0.270)	4/200	NT	16.5%	intergenic (+40/‑80)	xdhB/xdhC	xanthine dehydrogenase subunit XdhB/xanthine dehydrogenase accessory factor
	?	NC_002947	= 4870755	25 (1.350)					intergenic (+60/‑60)	xdhB/xdhC	xanthine dehydrogenase subunit XdhB/xanthine dehydrogenase accessory factor

GATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTGGCGAAGCCTGCGTGCTGGTGACCATC  >  NC_002947/4870588‑4870883                                                                                                                                                    |                                                                                                                                                      gATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAAGAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCg                                                                                                                                                     >  1:569303/1‑150 (MQ=255)  aTGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGa                                                                                                                                                    <  1:213322/150‑1 (MQ=255)  aTGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCACATGCGCAAGGCAGTAGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGa                                                                                                                                                    <  1:292748/150‑1 (MQ=255)                          tGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTAcattcgc                                                                                                                            <  2:418754‑M2/150‑8 (MQ=255)                          tGCGGTGTGGCTGCGAGCAGATTCGCAAGGCAGTGGCCGAAACACAGCCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTAcattcgc                                                                                                                            >  1:245790‑M2/1‑143 (MQ=255)                            cTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTAcattcgcgg                                                                                                                          >  1:418754‑M2/1‑141 (MQ=255)                            cTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCATGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGATTGtagggttggagctgatatcgcattcgcgg                                                                                                                          <  2:226797‑M1/150‑30 (MQ=255)                                        gAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGATTACCCGCGAATGCGATATCAGCTCCAACGCTAcattcgcgggtaaacccgctc                                                                                                              <  1:317705‑M2/150‑22 (MQ=255)                                           cAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTAcattcgcgggtaaacccgctccta                                                                                                           >  1:437587‑M2/1‑126 (MQ=255)                                            aGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTAcattcgcgggtaaacccgctcctac                                                                                                          <  1:93574‑M2/150‑26 (MQ=255)                                              tctcgcAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCa                                                                                                        <  1:377918/147‑1 (MQ=255)                                                  gcAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGt                                                                                                    >  1:251072/1‑150 (MQ=255)                                                  gcAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAAATGGAAACCAAAACCACCTAACAGCGCTTTAACTATTTCGTATTTGTAGTACTCATGAAGTTTATATCAGCTCCTACGCTACATTCGCGGGTAAACCCGCTCCTACCAgaga                                                                                                    >  2:377918/1‑147 (MQ=255)                                                       gCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGgca                                                                                              <  2:204708/150‑1 (MQ=255)                                                           tgccTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTcc                                                                                                                                          <  1:538991/100‑1 (MQ=255)                                                           tGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTcc                                                                                                                                          >  2:538991/1‑103 (MQ=255)                                                                gAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCtt                                                                                     <  2:569303/150‑1 (MQ=255)                                                                 aaaCACAGTCGCGCGAACGGGAACTTGAAACCATCCCCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTa                                                                                    <  1:341018/150‑1 (MQ=255)                                                                  aaCACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCTCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTag                                                                                   >  2:372604/1‑150 (MQ=255)                                                                        gTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGt                                                                             >  2:65765/1‑150 (MQ=255)                                                                         tCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGtt                                                                            <  2:93574/150‑1 (MQ=255)                                                                         tCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGtt                                                                            <  2:317705/150‑1 (MQ=255)                                                                                   gggAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATAGCAGCTCCAACGATACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCa                                                                  >  1:380915/1‑150 (MQ=255)                                                                                          ggAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGtagcgttggagctgatatcgcattcgcggg                                                                                                                         >  1:496124‑M1/1‑59 (MQ=255)                                                                                          ggAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGtagcgttggagctgatatcgcattcgcggg                                                                                                                         <  2:496124‑M1/89‑31 (MQ=255)                                                                                           gAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGa                                                          <  2:155511/150‑1 (MQ=255)                                                                                           gAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCAAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGa                                                          >  2:180104/1‑150 (MQ=255)                                                                                              aCCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAg                                                                                                       <  2:578089/103‑1 (MQ=255)                                                                                              aCCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAg                                                                                                       >  1:578089/1‑103 (MQ=255)                                                                                                cATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGtagcgttggagctgatatcgcattcgcgg                                                                                                                          <  2:124689‑M1/82‑30 (MQ=255)                                                                                                cATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGtagcgttggagctgatatcgcattcgcgg                                                                                                                          >  1:124689‑M1/1‑53 (MQ=255)                                                                                                cATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAAc                                                     >  1:392900/1‑150 (MQ=255)                                                                                                 aTCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACg                                                    >  1:402199/1‑150 (MQ=255)                                                                                                  tCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGGTTACCCGCGAATGCGATATCAGCTCCAACGCTACATGCCTGGGTGCATCAGGT‑CGACCATGGTCCGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGc                                                   >  1:534608/1‑150 (MQ=255)                                                                                                     cccccTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCACGGCTGAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCt                                                >  1:6051/1‑150 (MQ=255)                                                                                                       cccTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCg                                              >  1:220053/1‑150 (MQ=255)                                                                                                                   aaGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCTGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGt                                  >  1:209647/1‑150 (MQ=255)                                                                                                                         cTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCGAACGGTAGATTGGCGGGTAAAAGCGCTCGTAGGAGGGG‑CGGCAGGATGGGTTAGAGAGGTTGCATCATGGATGAATGGATTAATGTACTCGCCGACCACCATTCCCGTg                            >  2:212216/1‑150 (MQ=255)                                                                                                                            gTAGGAGCGGGTTTACCCGCGAATGtagcgttggagctgatatcgcattcgcgggtaaacccgctcctacaagggccttgcgttgtcagggggtgatggtttccagttcccgttcgcgcgactgtgtttcagccactgccttgcgcatct                          <  1:93574‑M1/150‑126 (MQ=255)                                                                                                                             tAGGAGCGGGTTTACCCGCGAATGtagcgttggagctgatatcgcattcgcgggtaaacccgctcctacaagggccttgcgttgtcagggggtgatggtttccagttcccgttcgcgcgactgtgtttcagccactgccttgcgcatctg                         >  1:437587‑M1/1‑24 (MQ=255)                                                                                                                             tAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTGGCGa                        >  1:472720/1‑150 (MQ=255)                                                                                                                              aGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAgg                                                                                                      <  2:348452/72‑1 (MQ=255)                                                                                                                              aGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAgg                                                                                                      >  1:348452/1‑72 (MQ=255)                                                                                                                                gAGCGGGTTTACCCGCGAATGtagcgttggagctgatatcgcattcgcgggtaatcccgctcctacaagggccttgcgttgtcagggggtgatggtttccagttcccgttcgcgcgactgtgtttcagccactgccttgcgcatctgctc                      <  1:317705‑M1/150‑130 (MQ=255)                                                                                                                                          aCCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCTGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTGGCGAAGCCTGCGTGCTg           <  2:209647/150‑1 (MQ=255)                                                                                                                                           cccGCGAATGCGATATCAGCTCCAACGCTAcattcgcgggtaaacccgctcctacaagggccttgcgttgtcagggggtgatggtttcc                                                                        <  2:496124‑M2/89‑60 (MQ=255)                                                                                                                                           cccGCGAATGCGATATCAGCTCCAACGCTAcattcgcgggtaaacccgctcctacaagggccttgcgttgtcagggggtgatggtttcc                                                                        >  1:496124‑M2/1‑30 (MQ=255)                                                                                                                                            ccGCGAATGtagcgttggagctgatatcgcattcgcgggtaaacccgctcctacaagggccttgcgttgtcagggggtgatggtttccagttcccgttcgcgcgactgtgtttcagccactgccttgcgcatctgctcgcagccccacag          >  1:418754‑M1/1‑9 (MQ=255)                                                                                                                                            ccGCGAATGCGATATCAGCTCCAACGCTAcattcgcgggtaaacccgctcctacaagggccttgcgttgtcagggggtgatg                                                                              <  2:124689‑M2/82‑54 (MQ=255)                                                                                                                                            ccGCGAATGCGATATCAGCTCCAACGCTAcattcgcgggtaaacccgctcctacaagggccttgcgttgtcagggggtgatg                                                                              >  1:124689‑M2/1‑29 (MQ=255)                                                                                                                                            ccGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAACCCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTGGCGAAGCCTGCGTGCTGGt         >  1:392860/1‑150 (MQ=255)                                                                                                                                            ccGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCa                                                                                                        <  2:566042/56‑1 (MQ=255)                                                                                                                                            ccGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCa                                                                                                        >  1:566042/1‑56 (MQ=255)                                                                                                                                            ccGCGAATGCGATATCAGCTCCAACCCTAcaatcgcgggtaaacccgctcctacaagggccttgcgttgtcatggggtgatggtttccagttcccgttcgcgcgactgtgtttcagccactgccttgcgcatctgctcgcagccccacag          <  2:226797‑M2/150‑122 (MQ=255)                                                                                                                                              gcgAATGtagcgttggagctgatatcgcattcgcgggtaaacccgctcctacaagggccttgcgttgtcagggggtgatggtttccagttcccgttcgcgcggctgtgtttcggccactgccttgcgaatctgctcgcagccacaccgca        >  1:245790‑M1/1‑7 (MQ=255)                                                                                                                                              gcgAATGtagcgttggagctgatatcgcattcgcgggtaaacccgctcctacaagggccttgcgttgtcagggggtgatggtttccagttcccgttcgcgcgactgtgtttcagccactgccttgcgcatctgctcgcagccccacagca        <  2:418754‑M1/150‑144 (MQ=255)                                                                                                                                              gcgAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTGGCGAAGCCTGCGTGCTGGTGa       <  2:153528/150‑1 (MQ=255)                                                                                                                                                   tGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTGGCGAAGCCTGCGTGCTAGTGACcatc  <  2:402199/150‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                      GATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTGGCGAAGCCTGCGTGCTGGTGACCATC  >  NC_002947/4870588‑4870883

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.