New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4870735	32 (1.380)	5 (0.270)	4/200	NT	16.5%	intergenic (+40/‑80)	xdhB/xdhC	xanthine dehydrogenase subunit XdhB/xanthine dehydrogenase accessory factor
	?	NC_002947	= 4870755	25 (1.350)					intergenic (+60/‑60)	xdhB/xdhC	xanthine dehydrogenase subunit XdhB/xanthine dehydrogenase accessory factor

TGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTGGCGAAGCCTGCGTGCTGGTGACCATCATCGAAG  >  NC_002947/4870613‑4870890                                                                                                                                               |                                                                                                                                         tGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTAcattcgc                                                                                                                                   <  2:418754‑M2/150‑8 (MQ=255) tGCGGTGTGGCTGCGAGCAGATTCGCAAGGCAGTGGCCGAAACACAGCCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTAcattcgc                                                                                                                                   >  1:245790‑M2/1‑143 (MQ=255)   cTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTAcattcgcgg                                                                                                                                 >  1:418754‑M2/1‑141 (MQ=255)               gAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGATTACCCGCGAATGCGATATCAGCTCCAACGCTAcattcgcgggtaaacccgctc                                                                                                                     <  1:317705‑M2/150‑22 (MQ=255)                  cAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTAcattcgcgggtaaacccgctccta                                                                                                                  >  1:437587‑M2/1‑126 (MQ=255)                   aGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTAcattcgcgggtaaacccgctcctac                                                                                                                 <  1:93574‑M2/150‑26 (MQ=255)                     tctcgcAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCa                                                                                                               <  1:377918/147‑1 (MQ=255)                         gcAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGt                                                                                                           >  1:251072/1‑150 (MQ=255)                         gcAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAAATGGAAACCAAAACCACCTAACAGCGCTTTAACTATTTCGTATTTGTAGTACTCATGAAGTTTATATCAGCTCCTACGCTACATTCGCGGGTAAACCCGCTCCTACCAgaga                                                                                                           >  2:377918/1‑147 (MQ=255)                              gCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGgca                                                                                                     <  2:204708/150‑1 (MQ=255)                                       gAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCtt                                                                                            <  2:569303/150‑1 (MQ=255)                                        aaaCACAGTCGCGCGAACGGGAACTTGAAACCATCCCCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTa                                                                                           <  1:341018/150‑1 (MQ=255)                                         aaCACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCTCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTag                                                                                          >  2:372604/1‑150 (MQ=255)                                               gTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGt                                                                                    >  2:65765/1‑150 (MQ=255)                                                tCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGtt                                                                                   <  2:93574/150‑1 (MQ=255)                                                tCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGtt                                                                                   <  2:317705/150‑1 (MQ=255)                                                          gggAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATAGCAGCTCCAACGATACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCa                                                                         >  1:380915/1‑150 (MQ=255)                                                                  gAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGa                                                                 <  2:155511/150‑1 (MQ=255)                                                                  gAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCAAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGa                                                                 >  2:180104/1‑150 (MQ=255)                                                                     aCCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAg                                                                                                              <  2:578089/103‑1 (MQ=255)                                                                     aCCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAg                                                                                                              >  1:578089/1‑103 (MQ=255)                                                                       cATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAAc                                                            >  1:392900/1‑150 (MQ=255)                                                                        aTCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACg                                                           >  1:402199/1‑150 (MQ=255)                                                                         tCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGGTTACCCGCGAATGCGATATCAGCTCCAACGCTACATGCCTGGGTGCATCAGGT‑CGACCATGGTCCGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGc                                                          >  1:534608/1‑150 (MQ=255)                                                                            cccccTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCACGGCTGAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCt                                                       >  1:6051/1‑150 (MQ=255)                                                                              cccTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCg                                                     >  1:220053/1‑150 (MQ=255)                                                                                          aaGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCTGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGt                                         >  1:209647/1‑150 (MQ=255)                                                                                                cTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCGAACGGTAGATTGGCGGGTAAAAGCGCTCGTAGGAGGGG‑CGGCAGGATGGGTTAGAGAGGTTGCATCATGGATGAATGGATTAATGTACTCGCCGACCACCATTCCCGTg                                   >  2:212216/1‑150 (MQ=255)                                                                                                    tAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTGGCGa                               >  1:472720/1‑150 (MQ=255)                                                                                                     aGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAgg                                                                                                             <  2:348452/72‑1 (MQ=255)                                                                                                     aGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAgg                                                                                                             >  1:348452/1‑72 (MQ=255)                                                                                                                 aCCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCTGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTGGCGAAGCCTGCGTGCTg                  <  2:209647/150‑1 (MQ=255)                                                                                                                  cccGCGAATGCGATATCAGCTCCAACGCTAcattcgcgggtaaacccgctcctacaagggccttgcgttgtcagggggtgatggtttcc                                                                               >  1:496124‑M2/1‑30 (MQ=255)                                                                                                                  cccGCGAATGCGATATCAGCTCCAACGCTAcattcgcgggtaaacccgctcctacaagggccttgcgttgtcagggggtgatggtttcc                                                                               <  2:496124‑M2/89‑60 (MQ=255)                                                                                                                   ccGCGAATGCGATATCAGCTCCAACGCTAcattcgcgggtaaacccgctcctacaagggccttgcgttgtcagggggtgatg                                                                                     <  2:124689‑M2/82‑54 (MQ=255)                                                                                                                   ccGCGAATGCGATATCAGCTCCAACGCTAcattcgcgggtaaacccgctcctacaagggccttgcgttgtcagggggtgatg                                                                                     >  1:124689‑M2/1‑29 (MQ=255)                                                                                                                   ccGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAACCCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTGGCGAAGCCTGCGTGCTGGt                >  1:392860/1‑150 (MQ=255)                                                                                                                   ccGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCa                                                                                                               >  1:566042/1‑56 (MQ=255)                                                                                                                   ccGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCa                                                                                                               <  2:566042/56‑1 (MQ=255)                                                                                                                   ccGCGAATGCGATATCAGCTCCAACCCTAcaatcgcgggtaaacccgctcctacaagggccttgcgttgtcatggggtgatggtttccagttcccgttcgcgcgactgtgtttcagccactgccttgcgcatctgctcgcagccccacag                 <  2:226797‑M2/150‑122 (MQ=255)                                                                                                                     gcgAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTGGCGAAGCCTGCGTGCTGGTGa              <  2:153528/150‑1 (MQ=255)                                                                                                                          tGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTGGCGAAGCCTGCGTGCTAGTGACcatc         <  2:402199/150‑1 (MQ=255)                                                                                                                                atCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTGGCGAAGCCTGCGTGCTGGTGACCATCATCGaa   <  1:372604/150‑1 (MQ=255)                                                                                                                                 tCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTGGCGAAGCCTGCGTGCTGGTGACCATCATCGAag  >  1:270688/1‑150 (MQ=255)                                                                                                                                              tACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTGGCGAAGCCTGCGt                      <  2:326870/117‑1 (MQ=255)                                                                                                                                              tACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTGGCGAAGCCTGCGt                      >  1:326870/1‑117 (MQ=255)                                                                                                                                               |                                                                                                                                         TGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGT‑CGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTGGCGAAGCCTGCGTGCTGGTGACCATCATCGAAG  >  NC_002947/4870613‑4870890

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.