| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4993002 | 29 (1.250) | 3 (0.140) | 3/236 | NT | 9.8% | coding (911/1233 nt) | bkdAA | branched‑chain alpha‑keto acid dehydrogenase complex subunit alpha |
| ? | NC_002947 | = 4993024 | 28 (1.280) | coding (933/1233 nt) | bkdAA | branched‑chain alpha‑keto acid dehydrogenase complex subunit alpha | |||||
GGCGAGTCGACCACCTTTGCCGGCCGTGGCGTGGGTTGCGGTATTGCTTCGCTGCGGGTTGACGGCAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTCGACGTCGGACGACCCCTCCAAGTACCGCCCTGCCGACGACTGGAGCCACTTCCCGCTGGGTGACCCGATCGCCCGCCTGAAGCAGCACCTGATCAAGATCGGCCACTGGTCCGAGGAA > NC_002947/4992854‑4993147 | ggCGAGTCGACCACCTTTGCCGGCCGTGGCGTGGGTTGCGGTATTGCTTCGCTGCGGGTTGACGGCAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTgg < 1:361876/150‑1 (MQ=255) cggccgTGGCGTGGGTTGCGGTATTGCTTCGCTGCGGGTTGACGGCAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGGGTCACCTACCGTGCCGGccc > 1:314562/1‑150 (MQ=255) tggcgtggGTTGCGGTATTGCTTCGCTGCGGGTTGACGGCAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGGGTCACCTACCGTGCCGGCCCGcactc > 2:562802‑M2/1‑145 (MQ=255) ggTATTGCTTCGCTGCGGGTTGACGGCAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGcgggccggcacggtaggtgacccactcgatcaggcttggg < 2:291253‑M1/150‑41 (MQ=255) gTATTGCTTCGCTGCGGGTTGACGGCAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTCGACGTCGGACGAcc > 2:414361/1‑150 (MQ=255) ttGCTTCGCTGCGGGTTGACGGCAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTCGACGTCGGACGACCCCt > 1:482217/1‑150 (MQ=255) ttCGCTGCGGGTTGACGGCAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTCGACGTCGGACGACCCCTCCaa > 1:270857/1‑150 (MQ=255) ttCGCTGCGGGTTGACGGCAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTCGACGTCGGACGACCCCTCCaa < 1:400741/150‑1 (MQ=255) ttCGCTGCGGGTTGACGGCAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTCGACGTCGGACGACCCCTCCaa > 1:536221/1‑150 (MQ=255) ttCGCTGCGGGTTGACGGCAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTCGACGTCGGACGACCCCTCCaa > 1:530073/1‑150 (MQ=255) ttCGCTGCGGGTTGACGGCAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTCGACATCGGACGACCCCTCCaa < 2:314562/150‑1 (MQ=255) ggTTGACGGCAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGcgggccggcacggtaggtgacccactcgatc < 2:404096‑M1/124‑32 (MQ=255) ggTTGACGGCAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGcgggccggcacggtaggtgacccactcgatc > 1:404096‑M1/1‑93 (MQ=255) cAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTCGACGTCGgac < 2:437983/121‑1 (MQ=255) cAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTCGACGTCGgac > 1:437983/1‑121 (MQ=255) cGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTCGACGTCGGACGACCCCTCCAAGTACCGCCCTGCCGACGACTg > 1:175079/1‑150 (MQ=255) cGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTCGACGTCGGACGACCCCTCCAAGTACCGCCCTGCCGACGACTg > 1:175184/1‑150 (MQ=255) aCTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTCATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTCGACGTCGGACGACCCCTCCAAGTACCGCCCTGCCGACGACTGGa < 1:414361/150‑1 (MQ=255) cTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTCGACGTCGGACGACCCCTCCAAGTACCGCCCTGCCGACGACTGGAg < 2:487768/150‑1 (MQ=255) cgtcgCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTCGACGTCGGACGACCCCTCCAAGTACCGCCCTGCCGACGACTGGAGCCa < 2:175079/150‑1 (MQ=255) cgtcgCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTCGACGTCGGACGACCCCTCCAAGTACCGCCCTGCCGACGACTGGAGCCa < 2:175184/150‑1 (MQ=255) cGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTCGACGTCGGACGACCCCTCCAAGTACCGCCCTGCCGACGACt > 1:533727/1‑137 (MQ=255) cGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTCGACGTCGGACGACCCCTCCAAGTACCGCCCTGCCGACGACt < 2:533727/137‑1 (MQ=255) cGTGTACGCTGCCTAGCGCTGGGCGGCCGAGCGCCCCCGCCGCGGCCTGGGCCCACGCCTGATCGTGTGGGTCACCTACCGTGCCGGCCCCCACTCGACGTCGGACGTCCCCTCCAAGTACCGCCCTGCCGACGACTGGAGCCACTcccc < 2:189981/150‑1 (MQ=255) aCGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTAGACGTCGGACGACCCCTCCAAGTACCGCCCTGCCGACGACTGGAGCCACTTCCCGCTgg < 2:500646/150‑1 (MQ=255) tGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTCGACGTCGGACGACCCCTCCAAGTACCGCCCTGCCGACGACTGGAGCCACTTCCTGCTGGGTGa > 1:450977/1‑150 (MQ=255) cTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCATGGGCCCAAGCCTGATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTCGACGTCGGACGAACCCTCGCAGTACCGCCCTGCCGACGACGGGAGCCACTGGCCGCTGGGTGAccc > 1:146812/1‑150 (MQ=255) tCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTCGACGTCGGACGACCCCTCCAAGTACCGCCCTGCCGACGACTGGAGCCACTTCCCGCTGGGTGACCCg > 1:30782/1‑150 (MQ=255) gcccgccGCGGCCTGGGCCCAAGCCTGATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTCGACGTCGGACGACCCCTCCAAGTACCGCCCTGCCGACGACTGGAGCCACTTCCCGCTGGGTGACCCGATCGCCCGCCTGAAGCAGCAc < 2:30782/150‑1 (MQ=255) gcccgccGCGGCCTGGGCCCAAGCCTGATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTCGACGTCGGACGACCCCCCCAAGTACCGCCCTGCCGACGACTGGAGCCACTTCCCGCTCGGTGACTCGATCGCCCGCCTGAAgaagcag < 2:181155/150‑2 (MQ=255) ggCCCAAGCCTGATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTCGACGTCGGACGACCCCTCCAAGTACCGCCCTGCCGACGACTGGAGCCACTTCCCGCTGGGTGACCCGATCGCCCGCCTGAAGCAGCACCTGATCAAGATCGGc < 2:482217/150‑1 (MQ=255) cccAAGCCTGATCGAGTGGGTCACCTACCGTGCCGGCCCGcactcgatcaggcttgggcccaggccgcggcgggcgcgctcggccgcccagcgcgaggcagcgtacacggcgacgaagtcgttgccgtcaacccgcagcgaagcaatacc < 2:291253‑M2/150‑111 (MQ=255) tGATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTCGACGTCGGACGACCCCTCCAAGTACCGCCCTGCCGACGACTGGAGCCACTTCCCGCTgg < 2:396822/96‑1 (MQ=255) tGATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTCGACGTCGGACGACCCCTCCAAGTACCGCCCTGCCGACGACTGGAGCCACTTCCCGCTgg > 1:396822/1‑96 (MQ=255) gATCGAGTGGGTCACCTACCGTGCCGGCCCGcactcgatcaggcttgggcccaggccgcggcgggcgcgctcggccgcccagcgcgaggcagcgtacacggcgacgaagtcgttgccgtcaacc < 2:404096‑M2/124‑94 (MQ=255) gATCGAGTGGGTCACCTACCGTGCCGGCCCGcactcgatcaggcttgggcccaggccgcggcgggcgcgctcggccgcccagcgcgaggcagcgtacacggcgacgaagtcgttgccgtcaacc > 1:404096‑M2/1‑31 (MQ=255) gATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTCGACGTCGGACGACCCCTCCAAGTACCGCCCTGCCGACGACTGGAGCCACTTCCCGCTGGGTGACCCGATCGCCCGCCTGAAGCAGCACCTGATCAAGATCGGCCACTGGTCCGa < 1:49249/150‑1 (MQ=255) gAGTGcgggccggcacggtaggtgacccactcgatcaggcttgggcccaggccgcggcgggcgcgctcggccgcccagcgcgaggcagcgtacacggcgacgaagtcgttgccgtcaacccgcagcgaagcaataccgcaacccacgcca > 2:562802‑M1/1‑5 (MQ=255) | GGCGAGTCGACCACCTTTGCCGGCCGTGGCGTGGGTTGCGGTATTGCTTCGCTGCGGGTTGACGGCAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGGGTCACCTACCGTGCCGGCCCGCACTCGACGTCGGACGACCCCTCCAAGTACCGCCCTGCCGACGACTGGAGCCACTTCCCGCTGGGTGACCCGATCGCCCGCCTGAAGCAGCACCTGATCAAGATCGGCCACTGGTCCGAGGAA > NC_002947/4992854‑4993147 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |