New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1025270 = | 14 (0.610) | 3 (0.170) | 3/196 | NT | 20.0% | intergenic (‑121/+108) | opdP/dppA‑II | glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein |
? | NC_002947 | 1025363 = | 13 (0.720) | intergenic (‑214/+15) | opdP/dppA‑II | glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein |
TACTTTCAAGGTTAAAGCTCCCTTTCTTTTCTAGTTATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGCCGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGC > NC_002947/1025141‑1025411 | ccgattacgccggtggcgcattccatcgtgagccagccgcttagcgtcaaggtttcccagttcaaggtcagcccgtttgggcgcaatgatttttccggtgtgagtgttgattaagcgttagccagtaccGGCCTCTTcgcgggcttgccc > 2:588789‑M1/130‑144 (MQ=255) cTTTCAAGGTTAAAGCTCCCTTTCTTTTCTAGTTATGGCCGGCCTTGTGGGCCGGGTGATTGCCGCGCACATGCCAGGGGTGCCGCGGGATCGCCGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGc < 1:500352/150‑1 (MQ=255) gTTAAAGCTCCCTTTCTTTTCTAGTTATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGCCGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAg < 2:134288/150‑1 (MQ=255) cTCCCTTTCTTTTCTAGTTATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGCCGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGgc < 2:136988/150‑1 (MQ=255) ccagccgcttagcgtcaaggtttcccagttcaaggtcagcccgtttgggcgcaatgatttttccggtgtgagtgttgattaagcgttagccagtaccg < 2:326316‑M1/1‑1 (MQ=255) ccagccgcttagcgtcaaggtttcccagttcaaggtcagcccgtttgggcgcaatgatttttccggtgtgagtgttgattaagcgttagccagtaccg > 1:326316‑M1/98‑98 (MQ=255) ttATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGCCGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGt < 2:488246/150‑1 (MQ=255) cggccTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGCCGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATc > 2:126718/1‑150 (MQ=255) ttGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGCCGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATCCtgtg < 1:22708/150‑1 (MQ=255) cccagttcaaggtcagcccgtttgggcgcaatgatttttccggtgtgagtgttgattaagcgttagccagtaccGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATCCTGTGGGAGCGGGc > 1:342390‑M1/75‑150 (MQ=255) cgcaatgatttttccggtgtgagtgttgattaagcgttagccagtaccGGCCTCTTcgc < 1:35759‑M1/11‑1 (MQ=255) cgcaatgatttttccggtgtgagtgttgattaagcgttagccagtaccGGCCTCTTcgc > 2:35759‑M1/49‑59 (MQ=255) gcaatgatttttccggtgtgagtgttgattaagcgttagccagtaccGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCTGTGTCCGAACCTGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAaga > 2:521152‑M1/48‑136 (MQ=255) gcaatgatttttccggtgtgagtgttgattaagcgttagccagtaccGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCTGTGTCCGAACCTGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAaga < 1:521152‑M1/89‑1 (MQ=255) cgcgGGCTCGCCGCGGAGAATCGGCGCGTTGTGTGGCCCGTGCTGGCCTCTTCGCACGCAACGCCGCGCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCCAGATCCTGGGGGACCGGCCTCGCCCGCGAAGAGGCCGGTACTGGCTAAc < 2:379612/150‑1 (MQ=255) gcgGGATCGCCGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGCTAGGGAGCAGCGTCTGAACCTGGCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACg > 1:294149/1‑150 (MQ=38) ccGGGCAGGATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAAACTGTCGAGATCCTGTGGGCGAGGGCTTACCGGCGAAGAGGCCGGTACTGGCTAACGCTTAATCaa > 1:560458/1‑150 (MQ=39) ggCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAacac < 1:193744/150‑1 (MQ=255) ggggCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGAACTGGCTAACGCTTAATCAACACTCACACCgg > 1:380276/1‑150 (MQ=255) gCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCt < 2:294633/36‑1 (MQ=255) gCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCt > 1:294633/1‑36 (MQ=255) gCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTgcgc > 1:202621/1‑150 (MQ=255) | TACTTTCAAGGTTAAAGCTCCCTTTCTTTTCTAGTTATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGCCGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGC > NC_002947/1025141‑1025411 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |