New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1263652 = | 25 (1.080) | 4 (0.180) | 4/242 | NT | 15.3% | coding (761/1659 nt) | PP_1105 | ATP‑dependent DNA ligase |
? | NC_002947 | 1263688 = | 20 (0.890) | coding (725/1659 nt) | PP_1105 | ATP‑dependent DNA ligase |
CACGGCCAGTTCCGTCTCGGTTTCACCGGGTTTCCAGACCAGGATCTCGCCATCGAGCACCACGCCATCGGGCAACGTCTGTGCCAGGCCATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGCCAGGAAGAATGGGTAGGGCTGA > NC_002947/1263504‑1263792 | cACGGCCAGTTCCGTCTCGGTTTCACCGGGTTTCCAGACCAGGATCTCGCCATCGAGCACCACGCCATCGGGCAACGTCTGTGCCAGGCCATGCAGTTCGGGGAAGCGCTCGGTAAACAGTTCTTCGACGCGTGACCACACCCTCAGCTg < 2:38739/150‑1 (MQ=255) aCGGCCAGTTCCGTCTCGGTTTCACCGGGTTTCCAGACCAGGATCTCGCCATCGAGCACCACGCCATCGGGCAACGTCTGTGCCCGGCCATGCTGTTCGGGGAATCGCTCGGTAACTTGTTTTTCGCCGCGTGGCCACACCCACAGCTgg < 2:226678/150‑1 (MQ=255) aCGGCCAGTTCCGTCTCGGTTTCACCGGGTTTCCAGACCAGGATCTCGCCATCGAGCACCACGCCATCGGGCAACGTCTGTGCCAGGCCATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTgg > 1:297852/1‑150 (MQ=255) ttCCGTCTCGGTTTCACCGGGTTTCCAGACCAGGATCTCGCCATCGAGCACCACGCCATCGGGCAACGTCTGTGCCAGGCCATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATcgcg > 1:318216/1‑150 (MQ=255) tctcGGTTTCACCGGGTTTCCAGACCAGGATCTCGCCATCGAGCACCACGCCATCGGGCAACGTCTGTGCCAGGCCATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTca < 1:316801/150‑1 (MQ=255) gccgatgaacacaaccagcgtggcggtcagccctacccattcttcctggcccatccgctgcaagtgtccagcgatcagttcgataccctgctcggaccaccaagcgattggcaaatcgaatggaagtgggaTGGCCATCGCGCTTcacca < 1:519550‑M1/19‑1 (MQ=255) gatctccGGGTTTCCAGACCGAGCTCTGGTCTTCGATCACCGCTCCATCTGGCAACGTCTGTGCCAGGCCATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACtt < 2:375750/145‑1 (MQ=255) cGGGTTTCCAGACCAGGATCTCGCCATCGAGCACCACGCCATCGGGCAACGTCTGTGCCAGGCCATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTgagatc > 1:375750/1‑145 (MQ=255) cAGACCAGGATCTCGCCATCGAGCACCACGCCATCGGGCAACGTCTGTGCCAGGCCATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCa > 1:1828/1‑150 (MQ=255) cgtggcggtcagccctacccattcttcctggcccatccgctgcaagtgtccagcgatcagttcgataccctgctcggaccaccaagcgattggcaaatcgaatggaagtgggaTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCAt > 2:519550‑M1/114‑150 (MQ=255) aGACCAGGATCTCGCCATCGAGCACCACGCCATCGGGCAACGTCTGTGCCAGGCCATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCAt > 1:338299/1‑150 (MQ=255) aCCAGGATCTCGCCATCGAGCACCACGCCATCGGGCAACGTCTGTGCCAGGCCATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATcc < 2:297852/150‑1 (MQ=255) cAGGATCTCGCCATCGAGCACCACGCCATCGGGCAACGTCTGTGCCAGGCCATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACAACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCa > 1:113498/1‑150 (MQ=255) ctacccattcttcctggcccatccgctgcaagtgtccagcgatcagttcgataccctgctcggaccaccaagcgattggcaaatcgaatggaagtgggaTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCAc > 1:440985‑M1/100‑141 (MQ=255) ctacccattcttcctggcccatccgctgcaagtgtccagcgatcagttcgataccctgctcggaccaccaagcgattggcaaatcgaatggaagtgggaTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCAc < 2:440985‑M1/42‑1 (MQ=255) ccATCGAGCACCACGCCATCGGGCAACGTCTGTGCCAGGCCATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATcg < 2:118315/108‑1 (MQ=255) ccATCGAGCACCACGCCATCGGGCAACGTCTGTGCCAGGCCATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATcg > 1:118315/1‑108 (MQ=255) aTCGAGCACCACGCCATCGGGCAACGTCTGTGCCAGGCCATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGAt < 2:318216/150‑1 (MQ=255) cGAGCACCACGCCATCGGGCAACGTCTGTGCCAGGCCATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGAttt > 1:152251/1‑150 (MQ=255) gCACCACGCCATCGGGCAACGTCTGTGCCAGGCCATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCgcgc < 1:266849/104‑1 (MQ=255) gCACCACGCCATCGGGCAACGTCTGTGCCAGGCCATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCgcgc > 2:266849/1‑104 (MQ=255) gCAACGTCTGTGCCAGGCCATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTc > 2:505837/1‑150 (MQ=255) cATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACt < 2:1828/150‑1 (MQ=255) cATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACt > 2:310941/1‑150 (MQ=255) cgcTCGGTAACTTGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCCATTATGCCCGGGTGCGATCCGCTTTCCATTCGATTTGCCACTCGCTTGGTGGTCCGAGCAGTGTATCGAACTGATCGCTGGACACTTGc < 1:505837/150‑1 (MQ=255) gTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGa > 1:409956/1‑150 (MQ=255) aCCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATgg < 1:310941/150‑1 (MQ=255) cAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGc < 2:409956/150‑1 (MQ=255) gccgcGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTg < 2:365623/121‑1 (MQ=255) gccgcGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTg > 1:365623/1‑121 (MQ=255) cgcgTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGCCAGGAAGAATg < 1:411002/150‑1 (MQ=255) acCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGCCAGGAAGAATGGGTAGGGCTGa > 2:28322/1‑150 (MQ=255) | CACGGCCAGTTCCGTCTCGGTTTCACCGGGTTTCCAGACCAGGATCTCGCCATCGAGCACCACGCCATCGGGCAACGTCTGTGCCAGGCCATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGCCAGGAAGAATGGGTAGGGCTGA > NC_002947/1263504‑1263792 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |