New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2300506 = | 14 (0.610) | 4 (0.180) | 4/236 | NT | 24.8% | coding (894/1239 nt) | sbcD | exonuclease subunit SbcD |
? | NC_002947 | 2300548 = | 11 (0.500) | coding (852/1239 nt) | sbcD | exonuclease subunit SbcD |
CTCCAGCCAGGGCTGGCGGTTGGGGTCTTCAAGCAGGTCGACCACGGGCAGGTCGGCCAGTTGCTGCAACAGCTCGCCCAGCGGTGCCGGGCCCACCCGTTGCAGGGCCACGGCGCGTGGTACGGGGCGTGGCTCGACGCTGACCAGGCCGTTACCGTCCAACTCCACTTCCAGGACCTGGTGCGGGTAGTTGATTTCGGCGAACGACAGCGGGATTGGCGAGCCGCTGTAGCGGATGCGCTCTTCGCGGTTG > NC_002947/2300443‑2300695 | cTCCAGCCAGGGCAGGCGGTGGGGATCTTCAAGCATGTCGACCACGGGCGGGGCGGGCAGTTGCTGCAACAGCACGCCCAGCGGTTCCCGGCCCACCCGTTGCAGGGCCACGGCGCGTGGTACCGGGCGTGGCTCGACGCCGACCAGGcc > 2:11218/1‑150 (MQ=255) agccagGGCTGGCGGTTGGGGTCTTCAAGCAGGTCGACCACGGGCAGGTCGGCCAGTTGCTGCAACAGCTCGCCCAGCGGTGCCGGGCCCACCCGTTGCAGGGCCACGGCGCGTGGTACGGGGCGTGGCTCGACGCTGACCAGGCCGTTa < 2:82491/150‑1 (MQ=255) ggTCTTCAAGCAGGTCGACCACGGGCAGGTCGGCCAGTTGCTGCAACAGCTCGCCCAGCGGTGCCGGGCCCACCCGTTGCAGGGCCACGGCGCGTGGTACGGGGCGTGGCTCGACGCTGACCAGGCCGTTACCGTCCAACTCCACTTCCa > 1:198929/1‑150 (MQ=255) tCTTCAAGCAGGTCGACCACGGGCAGGTCGGCCAGTTGCTGCAACAGCTCGCCCAGCGGTGCCGGGCCCACCCGTTGCAGGGCCACGGCGCGTGGTACGGGGCGTGGCTCGACGCTGACCAGGCCGTTACCGTCCAACTCCACTTCCAgg < 1:158133/150‑1 (MQ=255) cACGGGCAGGTCGGCCAGTTGCTGCAACAGCTCGCCCAGCGGTGCCGGGCCCACCCGTTGCAGGGCCACGGCGCGTGGTACGGGGCGTGGCTCGACGCTGACCAGGCCGTTACCGTCCAACTCCACTTCCAGGACCTGGTGCGGGTAGtt < 1:151250/150‑1 (MQ=255) gtaccacgcgccgtggccCTGCAACAGCTCGCCCAGCGGTGCCGGGCCCACCCGTTGCAGGGCCACGGCGCGTg > 1:598592‑M1/19‑74 (MQ=255) gtaccacgcgccgtggccCTGCAACAGCTCGCCCAGCGGTGCCGGGCCCACCCGTTGCAGGGCCACGGCGCGTg < 2:598592‑M1/56‑1 (MQ=255) cacgcgccgtggccctgcaacgggtgggcccggcaccgctgggcgagctgttgcagGGCCACGGCGCGTGGTAc > 1:598592‑M2/57‑74 (MQ=255) cacgcgccgtggccctgcaacgggtgggcccggcaccgctgggcgagctgttgcagGGCCACGGCGCGTGGTAc < 2:598592‑M2/18‑1 (MQ=255) ggagaGTTGCTGCAACAGCACGCCCAGCGGTGCCGGGCCCACCCGTTGCAGGGCCACGGCGCGTGGTACGGGGCGTGGCTCGACGCTGACCAGGCCGTTACCGTCCAACTCCACTTCCAGGACCTGGTGCGGGGAGTTGATTTCGGCGaa > 2:127547/5‑150 (MQ=255) ccAGTTGCTGCAACAGCTCGCCCAGCGGTGCCGGGCCCACCCGTTGCAGGGCCACGGCGCGTGGTACGGGGCGTGGCTCGACGCTGACCAGGCCGTTACCGTCCAACTCCACTTCCAGGACCTGGTGCGGGTAGTTGATTTCGGCGAACg > 2:158225/1‑150 (MQ=255) ctgcaacgggtgggcccggcaccgctgggcgagctgttgcagGGCCACGGCGCGTGGTACGGGGCGTGGCTCGACGCTGACCAGGCCGTTACCGTCCAACTCCACTTCCAGGACCTGGTGCggg > 1:565794‑M2/43‑124 (MQ=255) ctgcaacgggtgggcccggcaccgctgggcgagctgttgcagGGCCACGGCGCGTGGTACGGGGCGTGGCTCGACGCTGACCAGGCCGTTACCGTCCAACTCCACTTCCAGGACCTGGTGCggg < 2:565794‑M2/82‑1 (MQ=255) cGGTGCCGGGCCCACCCGTTGCAGGGCCACGGCGCGTGGTACGGGGCGTGGCTCGACACTAACCAGGCCGTTACCGTCCAACTCCACTTCCAGGACCTGGTGCGGGTAGTTGATTTCGGCGAACGACAGCGGGATTGGCGAGCCGCTGTa < 2:391646/150‑1 (MQ=255) gCCCACCCGTTGCAGGGCCACGGCGCGTGGTACGGGGCGTGGCTCGACGCTGACCAGGCCGTTACCGTCCAACTCCACTTCCAGGACCTGGTGCGGGTAGTTGATTTCGGCGAACGACAGCGGGATTGGCGAGCCGCTGTAGCGGATgcg > 1:139784/1‑150 (MQ=255) cccACCCGTTGCAGGGCCACGGCGCGTGGTACGGGGCGTGGCTCGACGCTGACCAGGCCGTTACCGTCCAACTCCACTTCCAGGAc > 1:240326/1‑86 (MQ=255) cccACCCGTTGCAGGGCCACGGCGCGTGGTACGGGGCGTGGCTCGACGCTGACCAGGCCGTTACCGTCCAACTCCACTTCCAGGAc < 2:240326/86‑1 (MQ=255) aCCCGTTGCAGGGCCACGGCGCGTGGTACGGGGCGTGGCTCGACGCTGACCAGGCCGTTACCGTCCAACTCCACTTCCAGGACCTGGTGCGGGTAGTTGATTTCGGCGAACGACAGCGGGATTGGCGAGCCGCTGTAGCGGATGCGctct > 2:294002/1‑150 (MQ=255) agGGCCACGGCGCGTGGTACGGGGCGTGGCTCGACGCTGACCAGGCCGTTACCGTCCAACTCCACTTCCAGGACCTGGTGCGGGTAGTTGATTTCGGCGAACGACAGCGGGATTGGCGAGCCGCTGTAGCGGATGCGCTCTTCGCGGTTg > 2:319665‑M2/3‑150 (MQ=255) ggCCACGGCGCGTGGTACGGGGCGTGGCTCGACGCTGACCAGGCCGTTACCGTCCAACTCCa < 1:266961/62‑1 (MQ=255) ggCCACGGCGCGTGGTACGGGGCGTGGCTCGACGCTGACCAGGCCGTTACCGTCCAACTCCa > 2:266961/1‑62 (MQ=255) | CTCCAGCCAGGGCTGGCGGTTGGGGTCTTCAAGCAGGTCGACCACGGGCAGGTCGGCCAGTTGCTGCAACAGCTCGCCCAGCGGTGCCGGGCCCACCCGTTGCAGGGCCACGGCGCGTGGTACGGGGCGTGGCTCGACGCTGACCAGGCCGTTACCGTCCAACTCCACTTCCAGGACCTGGTGCGGGTAGTTGATTTCGGCGAACGACAGCGGGATTGGCGAGCCGCTGTAGCGGATGCGCTCTTCGCGGTTG > NC_002947/2300443‑2300695 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |