New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2359601	28 (1.210)	4 (0.180)	3/238	NT	12.8%	coding (516/924 nt)	PP_2074	LysR family transcriptional regulator
	?	NC_002947	= 2359606	28 (1.270)					coding (521/924 nt)	PP_2074	LysR family transcriptional regulator

GGTCGTGCAGCATGTGGACTACTGGCGCATTCCGGACCTGCTGGCGGCGGGCGACGTGACGGTGGGTATCAGCCAGACCAAGGGCCTGCCCGCCAATGCCAAACGCAAGGTGCTACGCACCCTGCAAGCCAGGGTAGTGCGGGCCGACAAGTCCAGCACGCCGCTTTCACTGGATGAGTTTTGCCAACGTCCGCATGTCCAGGTTTCGCCAACCGCCAACACCCAGGGTGTGGTCGATGACTGGTTGAAAGACATCGGCCGTG  >  NC_002947/2359478‑2359740                                                                                                                                 |                                                                                                                                       ggtCGTGCAGCATGTGGACTACTGGCGCATTCCGGACCTGCTGGCGGCGGGCGACGTGACGGTGGGTATCAGCCAGACCAAGGGCCTGCCCGCCAATGCCAAACGCAAGGTGCTACGCACCCTGCAAGCCAGGGTAGTGCGGGCCGACaa                                                                                                                   <  1:210738/150‑1 (MQ=255)     gTGCAGCATGTGGACTACTGGCGCATTCCGGACCTGCTGGCGGCGGGCGACGTGACGGTGGGTATCAGCCAGACCAAGGGCCTGCCCGCCAATGCCAAACGCAAGGTGCTACGCACCCTGGCTTGcagggtgcgtagcaccttgcgtttg                                                                                                               >  2:544041‑M2/1‑125 (MQ=255)                       tGGCGCATTCCGGACCTGCTGGCGGCGGGCGACGTGACGGTGGGTATCAGCCAGACCAAGGGCCTGCCCGCCAATGCCAAACGCAAGGTGCTACGCACCCTGCAAGCCAGGGTAGTGCGGGCCGACAAGTCCAGCACGCCGCTTTCACTg                                                                                             >  2:403484/1‑150 (MQ=255)                       tGGCGCATTCCGGACCTGCTGGCGGCGGGCGACGTGACGGTGGGTATCAGCCAGACCAAGGGCCTGCCCGCCAATGCCAAACGCAAGGTGCTACGCACCCTGCAAGCCAGGGTAGTGCGGGCCGACAAGTCCAGCACGCCGCTTTCACTg                                                                                             <  1:403484/150‑1 (MQ=255)                         gcgcATTCCGGACCTGCTGGCGGCGGGCGACGTGACGGTGGGTATCAGCCAGACCAAGGGCCTGCCCGCCAATGCCAAACGCAAGGTGCTACGCACCCTGCAAGCCACACTGTTGCGGGCCGACAAGTCCAGCACGCCGCTTTCACTGGa                                                                                           >  1:163144/1‑150 (MQ=255)                            cATTCCGGACCTGCTGGCGGCGGGCGACGTGACGGTGGGTATCAGCCAGACCAAGGGCCTGCCCGCCAATGCCAAACGCAAGTTGCTACGCACCCTGCAAGCCAGGGTAGTGCGGGCCGACAAGTCAAGCACGCCGCTTTCAATGGGTGa                                                                                        <  2:471583/150‑1 (MQ=255)                            cATTCCGGACCTGCTGGCGGCGGGCGACGTGACGGTGGGTATCAGCCAGACCAAGGGCCTGCCCGCCAATGCCAAACGCAAGGTGCTACGCACCCTGCAAGCCAGGGTAGTGCGAGCCGACAAGTCCAGCACGCCGCTTTCACTGGATGa                                                                                        >  2:51920/1‑150 (MQ=255)                                  ggACCTGCTGGCGGCGGGCGACGTGACGGTGGGTCTCAGCGGGCATCNGCATGTTTTCGCCAAGGCGAAACTGAATGTGCTACGCACCCTGCAAGCCAGGGTAGTGCGGGCCGACAAGTCCAGCACGCCGCTTTCACTGGATGAGTTTTg                                                                                  >  1:11849/1‑150 (MQ=255)                                      ctgctgGCGGCGGGCGACGTGACGGTGGGTATCAGCCAGACCAAGGGCCTGCCCGCCAATGCCAAACGCAAGGTGCTACGCACCCTGCAAGCCAGGGTAGTGCGGGCCGACAAGTCCAGCACGCCGCTTTCACTGGATGAGTTTTGCCaa                                                                              >  2:480600/1‑150 (MQ=255)                                                                ggggATCAGCCAGACCAAGGGCCTGCCCGCCAATGCCAAACGCAAGGTGCTACGCACCCTGCAAGCAAGGGTAGTGCGGGCCGACAAGTCCAGCACGCCGCTTTCACTGGATGAGTTTTGCCAACGTCCGCATGTCCAGGTTTcgccaac                                                    >  2:168839/1‑150 (MQ=255)                                                                     tCAGCCAGACCAAGGGCCTGCCCGCCAATGACAAACGCAAGGTGCTACACACCATGCAAGCCAGGGTAGTGCGGGCCGACAAGTCCAGCACGCCGCTTTCACTGGATGAGTTTTGCCAACGTCCGCATGTCCAGGTTTcgccaaccgcca                                               >  1:95244/1‑150 (MQ=255)                                                                             aCCAAGGGGCTGCCCGCCAATGGCAAACGCGAGGTGCTACGCACCCTGCAAGCCAGGGTAGTGCGGGCCTACAAGTCCAGCACGCCGCTTTCACTGGATGAGTTTTGCCAACGTCCGCATGTCCAGGTTTCGCCAACCGCCAACACCCAg                                       <  2:11849/150‑1 (MQ=255)                                                                              ccAAGGGCCTGCCCGCCAATGCCAAACGCAAGGTGCTACGCACCCTGCAAGCCAGGGTAGTGCGGGCCGACAAGTCCAGCACGCCGCTTTCACTGGATGAGTTTTGCCAACGTCCGCATGTCCAGGTTTCGCCAACCGCCAACACCCAgg                                      >  1:412275/1‑150 (MQ=255)                                                                              ccAAGGGCCTGCCCGCCAATGCCAAACGCAAGGTGCTACGCACCCTGCAAGCCAGGGTAGTGCGGGCCGACAAGTCCAGCACGCCGCTTTCACTGGATGAGTTTTGCCAACGTCCGCATGTCCAGGTTTCGCCAACCGCCAACACCCAgg                                      >  1:272174/1‑150 (MQ=255)                                                                                 agtgCCTGCCCCCCACTATCAAACCCAAGGTGCTACGCACCCTGCAAGCCAGGGTAGTGCGGGCCGACAAGTCCAGCACGCCGCTTTCACTGCATGAGTTTTGCCAACGTCCGCATGTTCAGGTGTCGCCAACCGCCAACCCCCAGGgtg                                   <  2:95244/147‑1 (MQ=255)                                                                                   ggCCTGCCCGCCAATGCCAAACGCAAGGTGCTACGCACCCTGCAAGCCAGGGTAGTGCGGGCCGACAAGTCCAGCACGCCGCTTTCACTg                                                                                             >  2:117738/1‑90 (MQ=255)                                                                                   ggCCTGCCCGCCAATGCCAAACGCAAGGTGCTACGCACCCTGCAAGCCAGGGTAGTGCGGGCCGACAAGTCCAGCACGCCGCTTTCACTg                                                                                             <  1:117738/90‑1 (MQ=255)                                                                                         cccGCCAATGCCAAACGCAAGGTGCTACGCACCCTGCAAGCCAGGGTAGTGCAGGCCGACAATTCCAGCACGTCGCTTTAGCTGGATGATGGTTGCCAACGTTCTCGTTGGCAGTGTGGGCCAACCGCCAACACCCAGGGTGTGGTCGAt                           <  1:168839/150‑1 (MQ=255)                                                                                                aTGCCAAACGCAAGGTGCTACGCACCCTGCAAGCCAGGGTAGTGCGGGCCGACAAGTCCAGCACGCCGCTTTCACTGGATGAGTTTTGCCAACGTCCGCATGTCCAGGTTTCGCCAACCGCCAACACCCAGGGTGTGGTCGATGACTGGt                    >  1:429971/1‑150 (MQ=255)                                                                                                 tGCCAAACGCAAGGTGCTACGCACCCTGCAAGCCAGGGTAGTGCGGGCCGACAAGTCCAGCACGCCGCTTTCACTGGATGAGTTTTGCCAACGTCCGCATGTCCAGGTTTCGCCAACCGCCAACACCCAGGGTGTGGTCGATGACTGGtt                   <  2:91076/150‑1 (MQ=255)                                                                                                     aaaCGCACGGTGCTACGCACCCTGCAAGCCAGGGTAGTGCGGGCCGACAAGTCCAGCACGCCGCTTTCACTGGATGAGTTTTGGCAACGTACGCATGTCCAGGTTTCGCCAACCGCCAACCCCCAGGGTGTGGTCGATGATTGGTTGaaa               <  2:92271/150‑1 (MQ=255)                                                                                                     aaaCGCAAGGTGCTACGCACCCTGCAAGCCAGGGTAGTGCGGGCCGACAAGTCCAGCACGCCGCTTTCACTGGATGAGTTTTGCCAACGTCCGCATGTCCAGGTTTCGCCAACCGCCAACACCCAGGGTGTGGTCGATGACTGGTTGaaa               <  1:355416/150‑1 (MQ=255)                                                                                                     aaaCGCAAGGTGCTACGCACCCTGCAAGCCAGGGTAGTGCGGGCCGACAAGTCCAGCACGCCGCTTTCACTGGATGAGTTTTGCCAACGTCCGCATGTCCAGGTTTCGCCAACCGCCAACACCCAGGGTGTGGTCGATGACTGGTTGaaa               <  2:412275/150‑1 (MQ=255)                                                                                                      aaCGCAAGGTGCTACGCACCCTGCAAGCCAGGGTAGTGCGGGCCGACAAGTCCAGCACGCCGCTTTCACTGGATGAGTTTTGCCAACGTCCGCATGTCCAGGTTTcgc                                                        <  1:133499/108‑1 (MQ=255)                                                                                                      aaCGCAAGGTGCTACGCACCCTGCAAGCCAGGGTAGTGCGGGCCGACAAGTCCAGCACGCCGCTTTCACTGGATGAGTTTTGCCAACGTCCGCATGTCCAGGTTTcgc                                                        >  2:133499/1‑108 (MQ=255)                                                                                                           aaGGTGCTACGCACCCTGCAAGCCAGGGTAGTGCGGGCCGACAAGTCCAGCACGCCGCTTTCACTGGATGAGTTTTGCCAACGTCCGCATGTCCAGGTTTCGCCAACCGCCAACACCCAGGGTGTGGTCGAt                           <  2:548897/132‑1 (MQ=255)                                                                                                           aaGGTGCTACGCACCCTGCAAGCCAGGGTAGTGCGGGCCGACAAGTCCAGCACGCCGCTTTCACTGGATGAGTTTTGCCAACGTCCGCATGTCCAGGTTTCGCCAACCGCCAACACCCAGGGTGTGGTCGAt                           >  1:548897/1‑132 (MQ=255)                                                                                                           aaGGTGCTACGCACCCTGCAAGCCAGGGTAGTGCGGGCCGACAAGTCCAGCACGCCGCTTTCACTGGATGAGTTTTGCCAACGTCCGCATGTCCAGGTTTCGCCAACCGCCAACACCCAGGGTGTGGTCGATGACTGGTTGAAAGACATc         >  2:122120/1‑150 (MQ=255)                                                                                                                  tACGCACCCTGCAAGCcagggtgcgtagcaccttgcgtttggcattggcgggcaggcccttggtctggctgatacccaccgtcacgtcgcccgccgccagcaggtccggaatgcgccagtagtccacatgctgcacgaccaccaccacgt  <  1:1405‑M2/150‑135 (MQ=255)                                                                                                                  tACGCACCCTGCAAGCcagggtgcgtagcaccttgcgtttggcattggcgggcaggccctt                                                                                           >  2:378049‑M2/1‑16 (MQ=255)                                                                                                                  tACGCACCCTGCAAGCcagggtgcgtagcaccttgcgtttggcattggcgggcaggccctt                                                                                           <  1:378049‑M2/61‑46 (MQ=255)                                                                                                                  tACGCACCCTGCAAGCCAGGGTAGTGCGGGCCGACAAGTCCAGCACGCCGCTTTCACTGGATGAGTTTTGCCAACGTCCGCATGTCCAGGTTTCGCCAACCGCCAACACCCAGGGTGTGGTCGATGACTGGTTGAAAGACATCGGCCGTg  >  2:19007/1‑150 (MQ=255)                                                                                                                                 |                                                                                                                                       GGTCGTGCAGCATGTGGACTACTGGCGCATTCCGGACCTGCTGGCGGCGGGCGACGTGACGGTGGGTATCAGCCAGACCAAGGGCCTGCCCGCCAATGCCAAACGCAAGGTGCTACGCACCCTGCAAGCCAGGGTAGTGCGGGCCGACAAGTCCAGCACGCCGCTTTCACTGGATGAGTTTTGCCAACGTCCGCATGTCCAGGTTTCGCCAACCGCCAACACCCAGGGTGTGGTCGATGACTGGTTGAAAGACATCGGCCGTG  >  NC_002947/2359478‑2359740

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.