New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3494626 | 27 (1.170) | 3 (0.140) | 3/238 | NT | 11.2% | coding (102/483 nt) | PP_3098 | hypothetical protein |
? | NC_002947 | = 3494655 | 22 (1.000) | coding (73/483 nt) | PP_3098 | hypothetical protein |
CGTATTCAAGGATGGAACCACCGAGCTGGCTGAAACCGTCGAGCTCTTCGGCGACCAGGGACTGGCGGGTGTTCACCAGGACTTCGAGGTCGCGGACGATGCTGGCCTTGTACTCGGCCAGCGAGCAGGTGCGCTGCGCTGCGGGCTCGGCCGACTGGTAGGGACGATCGTCCAGCAGTCGGTCGAGCAGCGAGGGCAGCAGGCGGGCCTGGTTACTCATGTGTCATCCCTGTACACAACGGCCTTTCAGCCGCGCGCGCCCTGTGGCAGCTCGGCAACCAGCCGCAGCGAGGCGGT > NC_002947/3494508‑3494804 | cGTATTCAAGGATGGAACCACCGAGCTGGCTGAAACCGTCGAGCTCTTCGGCGACCAGGGACTGGCGGGTGTTCACCAGGACTTCGAGGTCGCGGACGATGCTGGCCTTGTACTCGGCCAGCGAGCAGGTGCGCTGCGCTGCGGGCTCga < 1:462927‑M2/150‑3 (MQ=255) tATTCAAGGATGGAACCACCGAGCTGGCTGAAACCGTCGAGCTCTTCGGCGACCAGGGACTGGCGGGTGTTCACCAGGACTTCGAGGTCGCGGACGATGCTGGCCTTGTACTCGGCCAGCGAGCAGGTGCGCTGCGCTGCGGGCTCggcc < 2:500304‑M2/150‑5 (MQ=255) gATGGAACCACCGAGCTGGCTGAAACCGTCGAGCTCTTCGGCGACCAGGGACTGGCGGGTGTTCACCAGGACTTCGAGGTCGCGGACGATGCTGGCCTTGTACTCGGCCAGCGAGCAGGTGCGCTGCGCTGCGGGCTCGGCCGACTGGTa < 2:599624/150‑1 (MQ=255) aTGGAACCACCGAGCTGGCTGAAACCGTCGAGCTCTTCGGCGACCAGGGACTGGCGGGTGTTCACCAGGACTTCGAGGTCGCGGACGATGCTGGCCTTGTACTCGGCCAGCGAGCAGGTGCGCTGCGCTGCGGGCTCGGCCGACTGGTAg < 1:39372/150‑1 (MQ=255) tGGAACCACCGAGCTGGCTGAAACCGTCGAGCTCTTCGGCGACCAGGGACTGGCGGGTGTTCACCAGGACTTCGAGGTCGCGGACGATGCTGGCCTTGTACTCGGCCAGCGAGCAGGTGCGCTGCGCTGCGGGCTCGGCCGACTGGTAgg < 2:60311/150‑1 (MQ=255) ccaccGAGCTGGCTGAAACCGTCGAGCTCTTCGCCGAGCAGGGACTGGCGGGTGTTCACCAGGACTTCGAGGTCGCGGACGATGCTGGCCTTGTACTCGGCCAGCGAGCAGGTGCGCTGCGCTGCGGGCTCGGCCGACTGGTAGGGACGa > 1:357397/1‑150 (MQ=255) caccGAGCTGGCTGAAACCGTCGAGCTCTTCGGCGACCAGGGACTGGCGGGTGTTCACCAGGACTTCGAGGTCGCGGACGATGCTGGCCTTGTACTCGGCCAGCGAGCAGGTGCGCTGCGCTGCGGGCGCGGCCGACTGGTAGGGACGAt > 1:465144/1‑150 (MQ=255) tgAAACCGTCGAGCTCTTCGGCGACCAGGGACTGGCGGGTGTTCACCAGGACTTCGAGGTCGCGGACGATGCTGGCCTTGTACTCGGCCAGCGAGCAGGTGCGCTGCGCTGCGGGCTCGGCCGACTGGTAGGGACGATCGTCCAGCAgtc > 1:25530/1‑150 (MQ=255) ggAAACCGTCGAGCTCTTCGGCGACCAGGGACTGGCGGGTGTTCACCAGGACTTCGAGGTCGCGGACGATGCTGGCCTTGTACTCGGCCAGCGAGCAGGTGCGCTGCGCTGCGGGCTCGGCCGACTTGTAGGGACGATCGTCCAGCAgtc < 2:161460/149‑1 (MQ=255) gCTCTTCGGCGACCAGGGACTGGCGGGTGTTCACCAGGACTTCGAGGTCGCGGACGATGCTGGCCTTGTACTCGGCCAGCGAGCAGGTGCGCTGCGCTGCGGGCTCGGCCGACTGGTAGGGa < 2:600484/122‑1 (MQ=255) gCTCTTCGGCGACCAGGGACTGGCGGGTGTTCACCAGGACTTCGAGGTCGCGGACGATGCTGGCCTTGTACTCGGCCAGCGAGCAGGTGCGCTGCGCTGCGGGCTCGGCCGACTGGTAGGGa > 1:600484/1‑122 (MQ=255) ctctTCGGCGACCAGGGACTGGCGAGTCGGCACCAGGACTTCGAGGTCGCGGACGATGCTGGCCTTGTACTCGGCCAGCGAGCAGGTGCGCTGCGCTGCGGGCTCGGCCGACTGGTAGGGACGATCGTCCAGCAGTCGGTCGAGCAGCGa < 1:403116/150‑1 (MQ=255) ggCGGGTGTTCACCAGGACTTCGAGGGCGCGGACGATGCTGGTCTTGTACTCGGCCAGCGAGCAGGTGCGCTGCGCTGCGGGCTCGGCCGACTGGTAGGGACGATCGCCCCGCAGTCGGTCGAGCAGCGAGGGCAGCAGGCGGGCCTGGt < 2:71811/150‑1 (MQ=255) cGGGTGTTCACCAGGACTTCGAGGTCGCGGACGATGCTGGCCTTGTACTCGGCCAGCGAGCAGGTGCGCTGCGCTGCGGGCTCGGCCGACTGGTAGGGACGATCGTCCAGCAGTCGGTCGAGCAGCGAGGGCAGCAGGCGGGCCTGGTTa < 1:500304/150‑1 (MQ=255) aCCAGGACTTCGAGGTCGCGGACGATGCTGGCCTTGTACTCGGCCAGCGAGCAGGTGCGCTGCGCTGCGGGCTCGGCCGACTGGTAGGGACGATCGTCCAGCAGTCGGTCGAGCAGCGAGGGCAGCAGGCGGGCCTGGTTACTCATgtgt > 1:315129/1‑150 (MQ=255) ccAGGACTTCGAGGTCGCGGACGATGCTGGCCTTGTACTCGGCCAGCGAGCAGGTGCGCTGCGCTGCGGGCTCGGCCGACTGGTAGGGACGATCGTCCAGCAGTCGGTCGAGCAGCGAGGGCAGCAGGCGGGCCTGGTTACTCATGTGTc > 1:507074/1‑150 (MQ=255) tGGCCTTGTACTCGGCCAGCGAGCAGGTGCGCTGCGCTGCGGGCTCGGCCGACTGGTAGGGACGATGGTCCAGCCGTCGGTCGAGCAGCGAGGTCAGGAGGCGGGGCTGGTTACTCGTGTGTCATCCCTGTAGACAACGGCCCTTCAGcc > 2:284071/1‑150 (MQ=255) gTACTCGGCCAGCGAGCAGGTGCGCTGCGCTGCGGGCTCggccgagtacaaggccagcatcgtccgcgacctcgaagtcctggtgaacacccgccagtccctggtcgccgaagagctcgacggtttcagccagctcggtggttccatcct < 1:83155‑M2/150‑112 (MQ=255) tCGGCCAGCGAGCAGGTGCGCTGCGCTGCGGGCTCggccgagtacaaggccagcatcgtccgcgacctcgaagtcctggtgaacacccgcca > 2:133211‑M2/1‑35 (MQ=255) tCGGCCAGCGAGCAGGTGCGCTGCGCTGCGGGCTCggccgagtacaaggccagcatcgtccgcgacctcgaagtcctggtgaacacccgcca < 1:133211‑M2/92‑58 (MQ=255) tCGGCCAGCGAGCAGGTGCGCTGCGCTGCGGGCTCGGCCGACTGGTAGGGACGATCGTCCAGCAGTCGGTCGAGCAGCGAGGGCAGCAGGCGGGCCTGGTTACTCATGTGTCATCCCTGTACACAACGGCCTTTCAGCCGCGCGCGCCCt > 1:470859/1‑150 (MQ=255) ggCCAGCGAGCAGGTGCGCTGCGCTGCGGGCTCGGCCGACTGGTAGGGACGATCGTCCAGCAGTCGGTCGAGCAGCGAGGGCAGCAGGCGGGCCTGGTTACTCATGTGTCATCCCTGTACACAACGGCCTTTCAGCCGCGCGCGCCCtgt > 2:512414/1‑150 (MQ=255) cAGCGAGCAGGTGCGCTGCGCTGCGGGCTCGGCCGACTGGTAGGGACGATCGTCCAGCAGTCGGTCGAGCAGCGAGGGCAGCAGGCGGGCCTGGTTACTCAt > 2:214142/1‑102 (MQ=255) cAGCGAGCAGGTGCGCTGCGCTGCGGGCTCGGCCGACTGGTAGGGACGATCGTCCAGCAGTCGGTCGAGCAGCGAGGGCAGCAGGCGGGCCTGGTTACTCAt < 1:214142/102‑1 (MQ=255) gTGCGCTGCGCTGCGGGCTCGGCCGACTGGTAGGGACGAGCGTCCAGCAGTCGGTCGAGCAGCGAGGGCAGCAGGCGGGCCTGGTTACTCATGTGTCATCCCTGTACACAATGGCCTTTCAGCCGCGCGCGCCCTGTGGCAGCTCggtgg < 2:357397/150‑4 (MQ=255) taaacggcgGGCTCGTCCGACTGGTAGGGACGCTCGTCCAGCAGTCGGTCGAGCAGCGAGGGCAGCAGGGGGGCCTGGTTACTCATGTGTCATCCCTGTACACAACGGCCTTTCAGCCGCGCGCGCCCTGTGGCAGCTCCGCAACCAGcc > 2:154530/7‑150 (MQ=255) gctgcgGGCTCGGCCGACTGGTAGGGACGATCGTCCAGCAGTCGGTCGAGCAGCGAGGGCAGCAGGCGGGCCTGGTTACTCATGTGTCATCCCTGTACACAACGGCCTTTCAGCCGCGCGCGCCCTGTGGCAGCTCGGCAACCAGCCGCa < 2:507074/150‑1 (MQ=255) tCGGCCGACTGGTAGGGACGATCGTCCAGCAGTCGGTCGAGCAGCGAGGGCAGCAGGCGGGCCTGGTTACTCATGTGTCATCCCTGTACACAACGGCCTTTCAGCCGCGCGCGCCCTGTGGCAGCTCGGCAACCAGCCGCAGCGAGGCgg > 1:448143/1‑150 (MQ=255) cGGCCGACTGGTAGGGACGATCGTACAGCAATCATTAGTGTAGCGAGGGCAGCAGGCGGGCCTGGTTACTCATGTGTCATCCCTGTACACAACGGCCTTTCAGCCGCGCGCGCCCTGTGGCAGCTCGGCAACCAGCCGCAGCGAGGCGGt < 2:315129/150‑1 (MQ=255) | CGTATTCAAGGATGGAACCACCGAGCTGGCTGAAACCGTCGAGCTCTTCGGCGACCAGGGACTGGCGGGTGTTCACCAGGACTTCGAGGTCGCGGACGATGCTGGCCTTGTACTCGGCCAGCGAGCAGGTGCGCTGCGCTGCGGGCTCGGCCGACTGGTAGGGACGATCGTCCAGCAGTCGGTCGAGCAGCGAGGGCAGCAGGCGGGCCTGGTTACTCATGTGTCATCCCTGTACACAACGGCCTTTCAGCCGCGCGCGCCCTGTGGCAGCTCGGCAACCAGCCGCAGCGAGGCGGT > NC_002947/3494508‑3494804 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |