New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5725015	22 (0.950)	4 (0.180)	4/242	NT	15.0%	coding (2007/2574 nt)	opgH	glucans biosynthesis glucosyltransferase H
	?	NC_002947	= 5725039	24 (1.070)					coding (1983/2574 nt)	opgH	glucans biosynthesis glucosyltransferase H

GCGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAGGAATGCGGCCAGCACGAAGCGGGTGTGGAAGATCATGCGTACCGGTGCCAGCAACATGGA  >  NC_002947/5724907‑5725176                                                                                                                                     |                                                                                                                                          gCGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTc                                                                                                                          <  2:75214/150‑1 (MQ=255) gCGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTc                                                                                                                          <  2:406071/150‑1 (MQ=255)                cGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGa                                                                                                           >  1:164583/1‑150 (MQ=255)                cGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGa                                                                                                           <  2:364834/150‑1 (MQ=255)                cGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGAGGGCCATGCCGGTGAACCGCTTCGCCCCACGGCGTGGa                                                                                                           <  2:320837/150‑1 (MQ=255)                 gATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAg                                                                                                          <  1:40132/150‑1 (MQ=255)                        ggATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCCCGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTc                                                                                                                          <  2:23240/127‑1 (MQ=255)                        ggATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTc                                                                                                                          >  1:23240/1‑127 (MQ=255)                                     cAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGa                                                                                      >  1:33826/1‑150 (MQ=255)                                      aGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAg                                                                                     <  2:164583/150‑1 (MQ=255)                                       gCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCCACGCACCGCTTCGCCCCACTGCTTTTAGTCGTCGTCACGCTGCGGCGAGt                                                                                    <  1:385357/150‑1 (MQ=255)                                             cgacgaTAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCCCCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAgg                                                                              >  1:136174/1‑150 (MQ=255)                                                     ggCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGcagcc                                                                      <  1:347858/150‑1 (MQ=255)                                                          cagccaCCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGCCACGCTGCGGCGAGTTCCAGGt                                                                             <  2:161085/138‑1 (MQ=255)                                                          cagccaCCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGCCACGCTGCGGCGAGTTCCAGGt                                                                             >  1:161085/1‑138 (MQ=255)                                                                          cTCGGGTTCAACCACGCCACCAGTGCGGCAACGCCACTGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAGGAATGCGGCCaag                                                 <  2:452759/150‑3 (MQ=255)                                                                                   aaCCACGCCACCAGTGCGCCCCAGGCAATGCCCAGCAGCGTCTGCGGCCCATGCCGGCGCACCGCTTCGCCAGCCGCCGTGTAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAGGAATGCGGCCAGCACGAAGCgg                                        <  1:139364/150‑1 (MQ=255)                                                                                                       ccAGGCAATGCCCAGCAGCGTCTGCGGGCCAtgcctgggccgcactggtggcgtggttgaacccgagcttcctgtggtggctggcgcctatcgtcggttcgctggtgctgtcgatcccggtatcggt                                           >  1:549131‑M2/1‑31 (MQ=255)                                                                                                       ccAGGCAATGCCCAGCAGCGTCTGCGGGCCAtgcctgggccgcactggtggcgtggttgaacccgagcttcctgtggtggctggcgcctatcgtcggttcgctggtgctgtcgatcccggtatcggt                                           <  2:549131‑M2/127‑97 (MQ=255)                                                                                                             aaTGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAGGAATGCGGCCAGCACGAAGCGGGTGTGGAAGATCATGCGTACCGGTGc              >  2:123194/1‑150 (MQ=255)                                                                                                               tGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACTCTGCGGCGAGTTCCAGGTCGCAGCCCAACCCAGGAATGCGGCCAGCACGAAGCGGGTGTGGAAGATCATGCGTACCGGTGCCa            <  1:600988/150‑1 (MQ=255)                                                                                                               tGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAAGAATGCGGCCAGCACGAAGCGGGTGTGGAAGATCATGCGTACCGGTGCCa            <  2:530143/150‑1 (MQ=255)                                                                                                               tGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGCCGCAGCCCAGCCGAGAAATGCGGCCAGCACGAAGCGGGTGTGGAAGATCATGCGTACCGGTGCCa            <  2:33826/150‑1 (MQ=255)                                                                                                                  ccAGCAGCGTCTGCGGGCCAtgcctgggccgcactggtggcgtggttgaacccgagcttcctgtggtggctggcgcctatcgtcg                                                                          >  1:65676‑M2/1‑20 (MQ=255)                                                                                                                  ccAGCAGCGTCTGCGGGCCAtgcctgggccgcactggtggcgtggttgaacccgagcttcctgtggtggctggcgcctatcgtcg                                                                          <  2:65676‑M2/85‑66 (MQ=255)                                                                                                                  ccAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAGGAATGCGGCCAGCACGAAGCGGgt                                      <  1:519025/121‑1 (MQ=255)                                                                                                                  ccAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAGGAATGCGGCCAGCACGAAGCGGgt                                      >  2:519025/1‑121 (MQ=255)                                                                                                                         cGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCCCAGCCCAGCCGAGGAATGCGGCCAGCACGAAGCGGGTGTGGAAGATCATGCGTACCGGTGCCAGCAACATGga  <  2:27073/150‑1 (MQ=255)                                                                                                                                     |                                                                                                                                          GCGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAGGAATGCGGCCAGCACGAAGCGGGTGTGGAAGATCATGCGTACCGGTGCCAGCAACATGGA  >  NC_002947/5724907‑5725176

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.