New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	25741 =	38 (1.640)	4 (0.190)	4/230	NT	11.0%	intergenic (+171/‑140)	PP_0020/PP_0021	hypothetical protein/hypothetical protein
	?	NC_002947	25779 =	30 (1.410)					intergenic (+209/‑102)	PP_0020/PP_0021	hypothetical protein/hypothetical protein

AATTGATTTTCTCCGGAGCCGGTGTCACTGTCGCTCCAAGAATAGCCCCCACGCCTCGGGCAGGTCCCAGACCTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAACCAGTGGGTGACCACCAAAAGGGTCAGTTAGGCCTACTGCTGCCTATCCTCGCTCGTTACCATCCAGAGACCCTCTATTGATACGGTTTCAGCAAAGATGGATGTCTATAAGGTCCGCATCGAAGACACAGAAAGCAAGATCAT  >  NC_002947/25635‑25927                                                                                                                                                 |                                                                                                                                                     ccatctttgctgaaaccgtatcaatagagggtctctggatggtaacgagcgaggataggcagcagtaggcctaactgacccttttggtggtcacccactggtttgaGGCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAAc                                                                                                                                                 >  2:193137‑M1/107‑150 (MQ=255)       ttttCTCCGGAGCCGGTGTCACTGTCGCTCCAAGAATAGCCCCCACGCTTCGGGCAGGTCCCAGACCTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAACCAGTgg                                                                                                                                           <  2:237286/150‑1 (MQ=255)                           aCTGTCGCTCCAAGAATAGCCCCCACGCCTCGGGCAGGTCCCAGACCTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAACCAGTGGGTGACCACCAAAAGGGTCAg                                                                                                                       >  2:416369/1‑150 (MQ=255)                                     cAAGAATAGCCCCCACGCCTCGGGCAGGTCCCAGACCTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAACCAGTGGGTGACCACCAAAAGGGTCAGTTAgg                                                                                                                  <  1:2015/145‑1 (MQ=255)                                     cAAGAATAGCCCCCACGCCTCGGGCAGGTCCCAGACCTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAACCAGTGGGTGACCACCAAAAGGGTCAGTTAgg                                                                                                                  >  2:2015/1‑145 (MQ=255)                                      aaGAATAGCCCCCACGCCTCGGGCAGGTCCCAGACCTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAACCAGTGGGTGACCACCAAAAGGGTCAGTTAGGCCTAct                                                                                                            >  1:308338/1‑150 (MQ=255)                                        gAATAGCCCCCACGCCTCGGGCAGGTCCCAGACCTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAACCAGTGGGTGacc                                                                                                                                     <  2:254518/123‑1 (MQ=255)                                        gAATAGCCCCCACGCCTCGGGCAGGTCCCAGACCTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAACCAGTGGGTGacc                                                                                                                                     >  1:254518/1‑123 (MQ=255)                                           tAGCCCCCACGCCTCGGGCAGGTCCCAGACCTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAACCAGTGGGTGACCACCAAAAGGGTCAGTTAGGCCTACtgctgc                                                                                                       >  2:490294/1‑150 (MQ=255)                                           tAGCCCCCACGCCTCGGGCAGGTCCCAGACCTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAACCAGTGGGTGACCACCAAAAGGGTCAGTTAGGCCTACtgctgc                                                                                                       <  1:490294/150‑1 (MQ=255)                                              cccccACGCCTCGGGCAGGTCCCAGACCTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAACCAGTGGGt                                                                                                                                         <  1:588689/113‑1 (MQ=255)                                              cccccACGCCTCGGGCAGGTCCCAGACCTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAACCAGTGGGt                                                                                                                                         >  2:588689/1‑113 (MQ=255)                                                cccACGCCTCGGGCAGGTCCCAGACCTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCaaa                                                                                                                                                  >  2:569947/1‑102 (MQ=255)                                                cccACGCCTCGGGCAGGTCCCAGACCTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCaaa                                                                                                                                                  <  1:569947/102‑1 (MQ=255)                                                cccACGCCTCGGGCAGGTCCCAGACCTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAACCAGTgg                                                                                                                                           <  2:100643/109‑1 (MQ=255)                                                cccACGCCTCGGGCAGGTCCCAGACCTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAACCAGTgg                                                                                                                                           >  1:100643/1‑109 (MQ=255)                                                                 tCCCAGACCTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAACCAGTGGGTGACCACCAAAAGGGTCAGTTAGGCCTACTGCTGCCTATCCTCGCTCGTTACCATcc                                                                                 >  1:53642/1‑150 (MQ=255)                                                                   ccAGACCTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAACAAACGGGTGACCCCGGATGGAATGAGTTAGGTCTACTGCTGCCTATCCTCGCTCGTTACCATCCag                                                                               >  1:599483/1‑150 (MQ=255)                                                                    cAGACCTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAACCAGTGGGTGACCACCAAAAGGGTCAGTTAGGCCTACtgctgc                                                                                                       <  2:295253/125‑1 (MQ=255)                                                                    cAGACCTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAACCAGTGGGTGACCACCAAAAGGGTCAGTTAGGCCTACtgctgc                                                                                                       >  1:295253/1‑125 (MQ=255)                                                                      gACCTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAACCAGTGGGTGACCACCAAAAGGGTCAGTTAGGCCTACTGCTGCCTATCCTCGCTCGTTACCATCCAgaga                                                                            <  2:502048/150‑1 (MQ=255)                                                                         cTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCAGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAACCATTGGGTGACCACCAAAAGGGTCAGTTAGGCCTACTGCTGCCTATCCTCGGTCGTTACCATCCAGAGAccc                                                                         >  2:260080/1‑150 (MQ=255)                                                                            tACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAACCAGTGGGTGACCACCAAAAGGGTCAGTTAGGCCTACTGCTGCCTATCCTCGCTCGTTACCATCCAGAGACCctct                                                                      >  1:539085/1‑150 (MQ=255)                                                                                  tcACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAACCAGTGGGTGACCACCAAAAGGGTCAGTTAGGCCTACTGCTGCCTATCCTCGCTCGTTACCATACAGAGACCCTCTATTGAt                                                                >  2:421891/2‑150 (MQ=255)                                                                                        gggggTTAGTTGTTTCTAGGGCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAACCAGTGGGTGACCACCAAAAGGGTCAGTTAGGCCTACTGCTGCCTATCCTCGCTCGTTACCATCCAGAGACCCTCTATTGATACGGtt                                                          <  2:539085/150‑1 (MQ=255)                                                                                                 ttgttTCTAGGGCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAACCAGTGGGTGACCACCAAAAGGGTCAGTTAGGCCTACTGCTGCCTATCCTCGCTCGTTACCATCCAGAGACCCTCTATTGATACGGTTTCAGCAAAg                                                 >  1:167967/1‑150 (MQ=255)                                                                                                     gtttgaggcccgcccaaagcatgcctgatcgacctgggcgggccTCAAACCAGTGGGTGACCACCAAAAGGGTCAGTTAGGCCTACTGCTGCCTATCCTCGCTCGTTACCATCCAGAGACCCTCTATTGATACGGTTTCAGCAAAgatgg                                             >  2:193137‑M2/45‑150 (MQ=255)                                                                                                       cTAGGGCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAACCAGTGGGTGACCACCAAAAGGGTCAGTTAGGCCTACTGCTGCCTATCCTCGCTCGTTACCATCCAGAGACCCTCTATTGATACGGTTTCAGCAAAgatggat                                           <  1:416369/150‑1 (MQ=255)                                                                                                          gggCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAACCAGTGGGTGACCACCAAAAGGGTCAGTTAGGCCTACTGCTGCCTATCCTCGCTCGTTACCATCCAGAGAcc                                                                          >  1:286102/1‑116 (MQ=255)                                                                                                          gggCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAACCAGTGGGTGACCACCAAAAGGGTCAGTTAGGCCTACTGCTGCCTATCCTCGCTCGTTACCATCCAGAGAcc                                                                          <  2:286102/116‑1 (MQ=255)                                                                                                            gcccgcccaaagcatgcctgatcgacctgggcgggccTCAAACCAGTGGGTGACCACCAAAAGGGTCAGTTAGGCCTACTGCTGCCTATCctcgctc                                                                                           >  2:592885‑M2/38‑97 (MQ=255)                                                                                                            gcccgcccaaagcatgcctgatcgacctgggcgggccTCAAACCAGTGGGTGACCACCAAAAGGGTCAGTTAGGCCTACTGCTGCCTATCctcgctc                                                                                           <  1:592885‑M2/60‑1 (MQ=255)                                                                                                                         gATCAGGCATGCTTTGGGCGGGCCTCAAACCAGTGGGTGACCACCAAAAGGGTCAGTTAGGCCTACTGCTGCCTATCCTCGCTCGTTACCATCCAGAGACCCTCTATTGATACGGTTTCAGCAAAGATGGATGTCTATAAGGTCCGCATc                         >  1:541510/1‑150 (MQ=255)                                                                                                                            cAGGCATGCTTTGGGCGGGCCTCAAACCAGTGGGTGACCACCAAAAGGGTCAGTTAGGCCTACTGCTGCCTATCCTCGCTCGTTACCATACAGAGACCCTCTATTGATACGGTTTCAGCAAAGATGGATGTCTATAAGGTCCGCATCGaa                      <  1:421891/150‑1 (MQ=255)                                                                                                                              tgatcgacctgggcgggccTCAAACCAGTGGGTGACCACCAAAAGGGTCAGTTAGGCCTACTGCTGCCTATCCTCGCTCGTTACCATCCAGAGACCCTCTATTGATACGGTTTCAGCAAAGATGGATGTCTATAAGGTCCGCATCGAAGa                    <  1:193137‑M2/131‑1 (MQ=255)                                                                                                                              ggCATGCTTTGGGCGGGCCTCAAACCAGTGGGTGACCACCAAAAGGGTCAGTTAGGCCTACTGCTGCCTATCCTCGCTCGTTACCATCCAGAGACCCTCTATTGATACGGTTTCAGCAAAGATGGATGTCTATAAGGTCCGCATCGAAGa                    <  2:53642/150‑1 (MQ=255)                                                                                                                               gCATGCTTTGGGCGGGCCTCAAACCAGTGGGTGACCACCAAAAGGGTCAGTTAGGCCTACTGCTGCCTATCCTCGCTCGTTACCATCCAGAGACCCTCTATTGATACGGTTTCAGCAAAGATGGATGTCTATAAGGTCCGCATCGAAGac                   >  2:409922/1‑150 (MQ=255)                                                                                                                                      ttGGGCGGGCCTCAAACCAGTGGGTGACCACCAAAAGGGTCAGTTAGGCCTACTGCTGCCTATCCTCGCTCGTTACCATCCAGAGACCCTCTATTGATACGGTTTCAGCAAAGATGGATGTCTATAAGGTCCGCATCGAAGACACAGaaa            <  2:167967/150‑1 (MQ=255)                                                                                                                                                cTCAAACCAGTGGGTGACCACCAAAAGGGTCAGTTAGGCCTACTGCTGCCTATCCTCGCTCGTTACCATCCAGAGACCCTCTATTGATACGGTTTCAGCAAAGATGGATGTCTATAAGGTCCGCATCGAAGACACAGAAAGCAAGatcat  >  2:179536‑M2/2‑150 (MQ=255)                                                                                                                                                 |                                                                                                                                                     AATTGATTTTCTCCGGAGCCGGTGTCACTGTCGCTCCAAGAATAGCCCCCACGCCTCGGGCAGGTCCCAGACCTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCAGGTCGATCAGGCATGCTTTGGGCGGGCCTCAAACCAGTGGGTGACCACCAAAAGGGTCAGTTAGGCCTACTGCTGCCTATCCTCGCTCGTTACCATCCAGAGACCCTCTATTGATACGGTTTCAGCAAAGATGGATGTCTATAAGGTCCGCATCGAAGACACAGAAAGCAAGATCAT  >  NC_002947/25635‑25927

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.