| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 302209 | 27 (1.160) | 6 (0.270) | 6/244 | NT | 17.2% | coding (373/1314 nt) | envZ | osmolarity sensor protein EnvZ |
| ? | NC_002947 | = 302222 | 32 (1.430) | coding (386/1314 nt) | envZ | osmolarity sensor protein EnvZ | |||||
TCCGGGTGACCGGCTCGGGTGTGCCCGAAGGCGAGCAGCATTGGCCCTACAGTGAGATCTACCAACGGCAGATGCAGGCCGAGCTGGGTGACGACACCGAAGTGCGGCTGCGCATCCATGCACCGCCCGCGTTGTGGGTCAATGCGCCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/302060‑302209‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaaCCCGGCCCCAGGCTTGGCGCATTGACCCACAACGCGGGCGGTGCATGGATGCGCAGCCGCACTTCGGTGTCGTCACCCAGCTCGGCCTGCATCTGCCGTTGGTAGATCTCACTGTAGGGCCAATGCTGCTCGCCTTCGGGCACACCC < NC_002947/302222‑302076 TCCGGGTGACCGGCTCGGGTGTGCCCGAAGGCGAGCAGCATTGGCCCTACAGTGAGATCTACCAACGGCAGATGCAGGCCGAGCTGGGTGACGACACCGAAGTGCGGCTGCGCATCCATGCACCGCCCGCGTTGTGGGTCAATGCGCCAA > 2:209755/1‑150 CGAAGGCGAGCAGCATTGGCCCTACAGTGAGATCTACCAACGGCAGATGCAGGCCGAGCTGGGTGACGACACCGAAGTGCGGCTGCGCATCCATGCACCGCCCGCGTTGTGGGTCAATGCGC > 1:263802/1‑122 CGAAGGCGAGCAGCATTGGCCCTACAGTGAGATCTACCAACGGCAGATGCAGGCCGAGCTGGGTGACGACACCGAAGTGCGGCTGCGCATCCATGCACCGCCCGCGTTGTGGGTCAATGCGC < 2:263802/122‑1 TACCAACGGCAGATGCAGGCCGAGCTGGGTGACGACACCGAAGTGCGGCTGCGCATCCATGCACCGCCCGCGTTGTGGGTCAATGCGCCAACCCGGCCCCAGGCTTGGCGCATTGA < 1:143283/116‑1 TACCAACGGCAGATGCAGGCCGAGCTGGGTGACGACACCGAAGTGCGGCTGCGCATCCATGCACCGCCCGCGTTGTGGGTCAATGCGCCAACCCGGCCCCAGGCTTGGCGCATTGA > 2:143283/1‑116 ATGCAGGCCGAGCTGGGTGACGACACCGAAGTGCGGCTGCGCATCCATGCACCGCCCGCGTTGTGGTTCAATGCGCCAACCCGGCCCCAGGCTTGG < 1:697/96‑1 ATGCAGGCCGAGCTGGGTGACGACACCGAAGTGCGGCTGCGCATCCATGCACCGCCCGCGTTGTGGTTCAATGCGCCAACCCGGCCCCAGGCTTGG > 2:697/1‑96 ACCGAAGTGCGGCTGCGCATCCATGCACCGCCCGCGTTGTGGGTCAATGCGCCAACCCGGCCCCAGGCTTGGCGCA < 1:584617/76‑1 ACCGAAGTGCGGCTGCGCATCCATGCACCGCCCGCGTTGTGGGTCAATGCGCCAACCCGGCCCCAGGCTTGGCGCA > 2:584617/1‑76 GCCAACCCGGCCCCAGGCTTGGCGCATTGACCCACAACGCGGGCGGTGCATGGATGCGCAGCCGCACTTCGGTGTCGTCACCCAGCTCGGCCTGCATCTGCCGTTGGTAGATCTCACTGTAGGGCCAATGCTGCTCGCCTTCGGGCACAC < 2:215685/150‑1 CCAACCCGGCCCCAGGCTTGGCGCATTGACCCACAACGCGGGCGGTGCATGGATGCGCAGCCGCACTTCGGTGTCGTCACCCAGCTCGGCCTGCATCTGCCGTTGGTAGATCTCACTGTAGGGCCAATGCTGCTCGCCTT < 1:74552/140‑1 CCAACCCGGCCCCAGGCTTGGCGCATTGACCCACAACGCGGGCGGTGCATGGATGCGCAGCCGCACTTCGGTGTCGTCACCCAGCTCGGCCTGCATCTGCCGTTGGTAGATCTCACTGTAGGGCCAATGCTGCTCGCCTT > 2:74552/1‑140 CAACCCGGCCCCAGGCTTGGCGCATTGACCCACAACGCGGGCGGTGCATGGATGCGCAGCCGCACTTCGGTGTCGTCACCCAGCTCGGCCTGCATCTGCCGTTGGTAGATCTCACTGTAGGGCCAATGCTGCTCGCCTTCGGGCACACCC < 1:42095/150‑1 TCCGGGTGACCGGCTCGGGTGTGCCCGAAGGCGAGCAGCATTGGCCCTACAGTGAGATCTACCAACGGCAGATGCAGGCCGAGCTGGGTGACGACACCGAAGTGCGGCTGCGCATCCATGCACCGCCCGCGTTGTGGGTCAATGCGCCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/302060‑302209‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaaCCCGGCCCCAGGCTTGGCGCATTGACCCACAACGCGGGCGGTGCATGGATGCGCAGCCGCACTTCGGTGTCGTCACCCAGCTCGGCCTGCATCTGCCGTTGGTAGATCTCACTGTAGGGCCAATGCTGCTCGCCTTCGGGCACACCC < NC_002947/302222‑302076 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |