| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1002378 = | 38 (1.630) | 3 (0.130) | 3/244 | NT | 8.8% | coding (612/1164 nt) | speC | ornithine decarboxylase |
| ? | NC_002947 | 1002468 = | 26 (1.160) | coding (522/1164 nt) | speC | ornithine decarboxylase | |||||
CATGGACCTGCTGATCCTCGCCCGCGACCTGGGCCTGGTGCCATACGGCATCTCCTTCCACGTGGGCTCGCAGCAACGCGACATCAGCGTGTGGGACGCCGCCATCGCCAAGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1002492‑1002378‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggtcGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCGGGACAGTGGCCAGTCGGCAGTGGTGGAGCCTTCAGTCAGAATACGCACATACACTTTCGAGCCCGGTGCGGCCTTG > NC_002947/1002468‑1002597 CATGGACCTGCTGATCCTCGCCCGCGACCTGGGCCTGGTGCCATACGGCATCTCCTTCCACGTGGGCTCGCAGCAACGCGACATCAGCGTGTGGGACGCCGCCATCGCCAAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGG > 1:97068/1‑150 CCGCGACCTGGGCCTGGTGCCATACGGCATCTCCTTCCACGTGGGCTCGCAGCAACGCGACATCAGCGTGTGGGACGCCGCCATCGCCAAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCGGG > 2:452788/1‑150 TGGGCCTGGTGCCATACGGCATCTCCTTCCACGTGGGCTCGCAGCAACGCGACATCAGCGTGTGGGACGCCGCCATCGCCAAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCGGGACAGTGGC < 1:452788/150‑1 AGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCGGGACAGTGGCCAGTCGGCAGTGGTGGAGCCTTCAGTCAGAATACGCACATACACTTTCGAGCCCGGTGCGGCCTTG < 1:169591/135‑1 AGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCGGGACAGTGGCCAGTCGGCAGTGGTGGAGCCTTCAGTCAGAATACGCACATACACTTTCGAGCCCGGTGCGGCCTTG > 2:169591/1‑135 CATGGACCTGCTGATCCTCGCCCGCGACCTGGGCCTGGTGCCATACGGCATCTCCTTCCACGTGGGCTCGCAGCAACGCGACATCAGCGTGTGGGACGCCGCCATCGCCAAGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1002492‑1002378‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggtcGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCGGGACAGTGGCCAGTCGGCAGTGGTGGAGCCTTCAGTCAGAATACGCACATACACTTTCGAGCCCGGTGCGGCCTTG > NC_002947/1002468‑1002597 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |