New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1002378 =	38 (1.630)	3 (0.130)	3/244	NT	8.8%	coding (612/1164 nt)	speC	ornithine decarboxylase
	?	NC_002947	1002468 =	26 (1.160)					coding (522/1164 nt)	speC	ornithine decarboxylase

GTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCGGGACAGTGGCCAGTCGGCAGTGGTGGAGCCTTCAGTCAGAATACGCACATACACTTTCGAGCCCGGTGCGGCCTTGGCGATGTTGCGCAG  >  NC_002947/1002321‑1002611                                                                                                                                                    |                                                                                                                                                gTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTcgcg                                                                                                                                               <  2:555482/150‑1 (MQ=255)  cccgcaagttcggctgccagaccgacatggccatggacctgctgatcctcgcccgcGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCgg                                                                                                                                              >  2:452788‑M1/57‑150 (MQ=255)      tCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGa                                                                                                                                          >  1:490288/1‑150 (MQ=255)      tCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGa                                                                                                                                          <  1:397107/150‑1 (MQ=255)                  cGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGt                                                                                                                              >  2:348078/1‑150 (MQ=255)                       ccgacatggccatggacctgctgatcctcgcccgcGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATg                                                                                                                         >  1:97068‑M1/36‑150 (MQ=255)                       ccGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATg                                                                                                                         >  1:189534/1‑150 (MQ=255)                                 catggacctgctgatcctcgcccgcgacctgggcctggtgccatacggcatctccttccacgtgggctcgcagcaacgcgacatcagcgtgtgggacgccgccatcgccaaggtcGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCgg                                                                                                               >  1:97068‑M2/116‑150 (MQ=255)                                            tCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCAt                                                                                                                    >  1:419898/1‑134 (MQ=255)                                            tCGAAGATTACCTTGACCTTGGCGACGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCag                                                                                                                    <  2:419898/134‑2 (MQ=255)                                                   ttACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTca                                                                                                            >  1:409172/1‑134 (MQ=255)                                                   ttACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTca                                                                                                            <  2:409172/135‑2 (MQ=255)                                                    tACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCg                                                                                            >  2:271906/1‑150 (MQ=255)                                                      ccgcgacctgggcctggtgccatacggcatctccttccacgtgggctcgcagcaacgcgacatcagcgtgtgggacgccgccatcgccaaggtcGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCggg                                                                                          >  2:452788‑M2/95‑150 (MQ=255)                                                              tgggcctggtgccatacggcatctccttccacgtgggctcgcagcaacgcgacatcagcgtgtgggacgccgccatcgccaaggtcGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCGGGACAGTGGc                                                                                  <  1:452788‑M2/64‑1 (MQ=255)                                                                       gcggcgTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCGGGACAGTGGCCAGTCGGCa                                                                         <  2:159/150‑1 (MQ=255)                                                                               ccACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGAGAGAGTATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCGGGACAGTGGCCAGTCGGCAGtggtggg                                                                 >  1:380770/1‑149 (MQ=255)                                                                                     gCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCGGGACAGTGGCCAGTCGGCAGTGGTGGAGCCTtc                                                           <  1:271906/150‑1 (MQ=255)                                                                                      cTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCGGGACAGTGGCCAGTCGGCAGTGGTGGAGCCTtca                                                          <  2:465517/150‑1 (MQ=255)                                                                                              gcgTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCGGGACAGTGGCCAGTCGGCAGTGGTGGAGCCTTCAGTCAGAAt                                                  >  2:269846/1‑150 (MQ=255)                                                                                                            ccACGTGGAAGGAGATGCCGTATGGCACCAGGCCCATGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCGGGACAGTGGCCAGTCGGCAGTGGTGGAGCCTTCAGTCAGAATACGCACATa                                         >  2:332551/1‑145 (MQ=255)                                                                                                            ccACGTGGAAGGAGATGCCGTATGGCACCAGGCCCATGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCGGGACAGTGGCCAGTCGGCAGTGGTGGAGCCTTCAGTCAGAATACGCACATa                                         <  1:332551/145‑1 (MQ=255)                                                                                                              aCGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCGGGACAGTGGCCAGTCGGCAGTGGTGGAGCCTTCAGTCAGAATACGCACATACACTTTc                                  <  1:527000/150‑1 (MQ=255)                                                                                                                      ggAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCGGGACAGTGGCCAGTCGGCAGTGGTGGAGCCTTCAGTCAGAATACGCACATACACTTTc                                  <  1:418429/142‑1 (MQ=255)                                                                                                                      ggAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCGGGACAGTGGCCAGTCGGCAGTGGTGGAGCCTTCAGTCAGAATACGCACATACACTTTc                                  >  2:418429/1‑142 (MQ=255)                                                                                                                      ggAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCGGGACAGTGGCCAGTCGGCAGTGGTGGAGCCTTCAGTCAGAATACGCACATACACTTTCGAGCCCgg                          >  1:23886/1‑150 (MQ=255)                                                                                                                            gCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGGTGGACAGTGGCCAGTCGGCAGTGGTGGAGCATTCAGTGAGAAGACGCACATACACTTTCGAGCCCGGTGCGGc                    >  1:347274/1‑150 (MQ=255)                                                                                                                            gCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCGGGACAGTGGCCAGTCGGCAGTGGTGGAGCCTTCAGTCAGAATACGCACATACACTTTCGAGCCCGGTGCGGc                    >  1:284054/1‑150 (MQ=255)                                                                                                                             ccGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCGGGACAGTGGCCAGTCGGCAGTGGTGGAGCCTTCAGTCAGAATACGCACATACACTTTCGAGCCCGGTGCGGcc                   <  2:284054/150‑1 (MQ=255)                                                                                                                              cGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCGGGACAGTGGCCAGTCGGCAGTGGTGGAGCCTTCAGTCAGAATACGCACATACACTTTCGAGCCCGGTGCGGCCt                  >  1:253014/1‑150 (MQ=255)                                                                                                                                 aTGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCGGGACAGTGGCCAGTCGGCAGTGGTGGAGCCTTCAGTCAGAATACGCACATACACTTTCGAGCCCGGTGCGGCCTTgg               <  1:348078/150‑1 (MQ=255)                                                                                                                                      aCCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCGGGACAGTGGCCAGTCGGCAGTGGTGGAGCCTTCAGTCAGAATACGCACATACACTTTCGAGCCCGGTGCGGCCTTGGCGATg          >  1:501365/1‑150 (MQ=255)                                                                                                                                              cAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCGGGACAGTGGCCAGTCGGCAGTGGTGGAGCCTTCAGTCAGAATACGCACATACACTTTCGAGCCCGGTGCGGCCTTGGCGATGTTGCGCAg  <  2:380770/150‑1 (MQ=255)                                                                                                                                               aggtcGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCGGGACAGTGGCCAGTCGGCAGTGGTGGAGCCTTCAGTCAGAATACGCACATACACTTTCGAGCCCGGTGCGGCCTTg                <  1:169591‑M2/130‑1 (MQ=255)                                                                                                                                               aggtcGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCGGGACAGTGGCCAGTCGGCAGTGGTGGAGCCTTCAGTCAGAATACGCACATACACTTTCGAGCCCGGTGCGGCCTTg                >  2:169591‑M2/6‑135 (MQ=255)                                                                                                                                                    |                                                                                                                                                GTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCGGGACAGTGGCCAGTCGGCAGTGGTGGAGCCTTCAGTCAGAATACGCACATACACTTTCGAGCCCGGTGCGGCCTTGGCGATGTTGCGCAG  >  NC_002947/1002321‑1002611

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.