| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3135354 | 27 (1.160) | 6 (0.280) | 6/236 | NT | 18.2% | intergenic (+23/‑37) | PP_2751/PP_2752 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | = 3135365 | 29 (1.340) | intergenic (+34/‑26) | PP_2751/PP_2752 | hypothetical protein/hypothetical protein | |||||
ATGGGTGCTGGTGACCGACTGGATCCAGGCCGACCGCACCACCTTGCGTCCGCTGATCGAGGCCAAGTCCGCCGCCTATGCCCAGGAGAAGGGCATCACCCCGCGTGATTGCGCCAACGAGCAATAAACCCCTATGACCTACGCCCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3135205‑3135354‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccggccCACGCGACG‑GT‑GGCCGGGCGTAGGTCATAGGGGTTTATTGCTCGTTGGCGCAATCACGCGGGGTGATGCCCTTCTCCTGGGCATAGGCGGCGGACTTGGCCTCGATCAGC < NC_002947/3135365‑3135256 ATGGGTGCTGGTGACCGACTGGATCCAGGCCGACCGCACCACCTTGCGTCCGCTGATCGAGGCCAAGTCCGCCGCCTATGCCCAGGAGAAGGGCATCACCCCGCGTGATTGCGCCAACGAGCAATAAACCCCTATGACCTACGCCCGGCC < 1:277249/150‑1 GGTGACCGACTGGATCCAGGCCGACCGCACCACCTTGCGTCCGCTGATCGAGGCCAAGTCCGCCGCCTATGCCCAGGAGAAGGGCATCACCCCGCGTGATTGCGCCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCCACGCGACG > 1:190167/1‑150 TGACCGACTGGATCCAGGCCGACCGCACCACCTTGCGTCCGCTGATCGAGGCCAAGTCCGCCGCCTATGCCCAGGAGAAGGGCATCACCCCGCGTGATTGCGCCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCCACGCGACG‑GT < 2:190167/150‑1 GCCGCCTATGCCCAGGAGAAGGGCATCACCCCGCGTGATTGCGCCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCTACGCGACG‑GT‑GGCCGGGCGTAG > 1:171325/1‑103 GCCGCCTATGCCCAGGAGAAGGGCATCACCCCGCGTGATTGCGCCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCTACGCGACG‑GT‑GGCCGGGCGTAG < 2:171325/103‑1 CCGCCTATGCCCAGGAGAAGGGCATCACCCCGCGTGATTGCGCCAACGAGCAATAAACCCCTATGACCTACGCCCG > 1:268894/1‑76 CCGCCTATGCCCAGGAGAAGGGCATCACCCCGCGTGATTGCGCCAACGAGCAATAAACCCCTATGACCTACGCCCG < 2:268894/76‑1 ACGAGCAATAAACCCCTATGACCTACGCCCGG‑CCAC‑CGTCGCGTGGGCCGGGCGTAGGTCATAGGGGTTTATTGCTCGTTGGCGCAATCACGCGGGGTGATGCCCTTCTCCTGGGCATAGGCGGCGGACTTGGCCTCGATCAGC > 1:464085/1‑144 ACGAGCAATAAACCCCTATGACCTACGCCCGG‑CCAC‑CGTCGCGTGGGCCGGGCGTAGGTCATAGGGGTTTATTGCTCGTTGGCGCAATCACGCGGGGTGATGCCCTTCTCCTGGGCATAGGCGGCGGACTTGGCCTCGATCAGC < 2:464085/144‑1 ATGGGTGCTGGTGACCGACTGGATCCAGGCCGACCGCACCACCTTGCGTCCGCTGATCGAGGCCAAGTCCGCCGCCTATGCCCAGGAGAAGGGCATCACCCCGCGTGATTGCGCCAACGAGCAATAAACCCCTATGACCTACGCCCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3135205‑3135354‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccggccCACGCGACG‑GT‑GGCCGGGCGTAGGTCATAGGGGTTTATTGCTCGTTGGCGCAATCACGCGGGGTGATGCCCTTCTCCTGGGCATAGGCGGCGGACTTGGCCTCGATCAGC < NC_002947/3135365‑3135256 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |