New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5856874	28 (1.200)	3 (0.130)	3/244	NT	10.4%	coding (745/1392 nt)	PP_5133	membrane protein
	?	NC_002947	= 5856913	25 (1.120)					coding (784/1392 nt)	PP_5133	membrane protein

GCGACCCGGCGCTATGGCTTTGTCTGGGAAACCACCTTGCTCGCCGCCGACCCGTTCATTCACCTGACCCAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGCCGTGAACGCCTGACGCTGGACCTGGGC  >  NC_002947/5856727‑5857023                                                                                                                                                    |                                                                                                                                                      gCGACCCGGCGCTATGGCTTTGTCTGGGAAACCACCTTGCTCGCCGCCGACCCGTTCATTCACCTGACCCAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTg                                                                                                                                                     >  1:287962/1‑150 (MQ=255)   gACCCGGCGCTATGGCTTTGTCTGGGAAACCACCTTGCTCGCCTCCGACCCGTTCATTCACCTGACCCAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCagct                                                                                                                                                   >  2:290097‑M1/1‑146 (MQ=255)           gcTATGGCTTTGTCTGGGAAACCACCTTGCTCGCCGCCGACCCGTTCATTCACCTGACCCAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTgg                                                                                                                                           >  1:484513/1‑150 (MQ=255)                       tCTGGGAAACCACCTTGCTCGCCGCCGACCCGTTCATTCACCTGACCCAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTAGCCCGcc                                                                                                                               >  2:296817/1‑150 (MQ=255)                        cTGGGAAACCACCTTGCTCGCCGCCGACCCGTTCATTCACCTGACCCAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCa                                                                                                                              >  1:396061/1‑150 (MQ=255)                                 caccTTGCTCGCCGCCGACCCGTTCATTCACCTGACCCAAGTACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGc                                                                                                                     >  2:230045/1‑150 (MQ=255)                                       gCTCGCCGCCGACCCGTTCATTCACCTGACCCAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTAGCCCGCCAGGCCTGGGCCAGCTg                                                                                                               >  1:296817‑M2/1‑149 (MQ=255)                                        cTCGCCGCCGACCCGTTCATTCACCTGACCCAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTgg                                                                                                              >  1:275466‑M2/1‑148 (MQ=255)                                          cgcctcCGACCCGTTCATTCACCTGACCCAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCagctggcccaggcctggcgggccacgtccagggctggtaggct                                                                                                            <  1:290097‑M1/150‑44 (MQ=255)                                            ccgccgACCCGTTCATTCACCTGACCCAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCagctggcccaggcctggcgggccacgtccagggctggcaggctgt                                                                                                          <  1:517782‑M1/150‑46 (MQ=255)                                             cgccgACCCGTTCATTCACCTGACCCAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCagctggcccaggcctggcgggccacgtccagggctggcaggctgtc                                                                                                         <  1:148495‑M1/150‑47 (MQ=255)                                                  aCCCGTTCATTCACCTGACCCAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCg                                                                                                    >  1:34458/1‑150 (MQ=255)                                                      gTTCATTCACCTGACCCAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCt                                                                                                                         <  2:557732/125‑1 (MQ=255)                                                      gTTCATTCACCTGACCCAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCt                                                                                                                         >  1:557732/1‑125 (MQ=255)                                                       ttcattcaCCTGACCCAAGTACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCGGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCgtggtg                                                                                               <  1:230045/150‑1 (MQ=255)                                                       ttcattcaCCTGACCCAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCgtggtg                                                                                               >  2:233493/1‑150 (MQ=255)                                                          attcaCCTGACCCAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTg                                                                                            >  2:501871/1‑150 (MQ=255)                                                            tcaCCTGACCCAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGt                                                                                          <  1:233493/150‑1 (MQ=255)                                                            tcaCCTGACCCAAGCACGGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTAGCTGCTCGGCGTGGTGCTGGt                                                                                          >  2:315241/1‑150 (MQ=255)                                                              aCCTGACCCAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGtat                                                                                        <  1:427876/150‑1 (MQ=255)                                                                      cAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTgg                                                                                                                       <  1:243385/111‑1 (MQ=255)                                                                      cAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTgg                                                                                                                       >  2:243385/1‑111 (MQ=255)                                                                       aaGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCctgc                                                                               >  2:414983/1‑150 (MQ=255)                                                                             tGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGcccc                                                                         >  2:386809/1‑150 (MQ=255)                                                                                      tCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCctgctgc                                                                >  1:7888/1‑150 (MQ=255)                                                                                        ccGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCctgctgctg                                                              >  1:22567/1‑150 (MQ=255)                                                                                              ttGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCggg                                                        >  1:399179/1‑150 (MQ=255)                                                                                                  tGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTgg                                                                                                                       <  1:236884/83‑1 (MQ=255)                                                                                                  tGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTgg                                                                                                                       >  2:236884/1‑83 (MQ=255)                                                                                                     gCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGcc                                                 >  2:95316/1‑150 (MQ=255)                                                                                                      cTTCGTCGGGCACGGCGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCt                                                >  2:287214/1‑150 (MQ=255)                                                                                                           ccGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGtggc                                           >  2:387017/1‑150 (MQ=255)                                                                                                                   gacgaAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGtggcgctggcgc                                   <  1:464840/150‑1 (MQ=255)                                                                                                                          ccATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGcc                            <  2:359766/150‑1 (MQ=255)                                                                                                                                         gcggcgACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGCCGTGAACGCCTGACGc             >  1:35715/1‑150 (MQ=255)                                                                                                                                              gACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTggctgtcgccgctggcgcggatcatggcttcgtcgggcacggcgaagcccagcaacgacgggagggcgcccagtgcttgggtcaggtgaatgaacgggtcggcg        <  1:148495‑M2/150‑105 (MQ=255)                                                                                                                                               aCAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTggctgtcgccgctggcgcggatcatggcttcgtcgggcacggcgaagcccagcaacgacgggagggcgcccagtgcttgggtcaggtgaatgaacgggtcggcgg       <  1:517782‑M2/150‑106 (MQ=255)                                                                                                                                                cAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGCCGTGAACGCCTGACGCTGGACCt      <  1:158789/150‑1 (MQ=255)                                                                                                                                                 aGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGCCGTGAACGCCTGACGCTGGACCTg     <  2:22567/150‑1 (MQ=255)                                                                                                                                                 aGCCTACCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTggctgtcgccgctggcgcggatcatggcttcgtcgggcacggcgaagcccagcaacgacgggagggcgcccagtgcttgggtcaggtgaatgaacgggtcggaggcg     <  1:290097‑M2/150‑108 (MQ=255)                                                                                                                                                   ccagctggcccaggcctggcgggccacgtccagggctggcaggctgtcgccgctggcgcggatcatggcttcgtcgggcacggcgaagcccagcaacgacgggagggcgcccagtgcttgggtcaggtgaatgaacgggtcggcggcgag   >  1:275466‑M1/1‑2 (MQ=255)                                                                                                                                                    cagctggcccaggcctggcgggctacgtccagggctggcaggctgtcgccgctggcgcggatcatggcttcgtcgggcacggcgaagcccagcaacgacgggagggcgcccagtgcttgggtcaggtgaatgaacgggtcggcggcgagc  >  1:296817‑M1/1‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                      GCGACCCGGCGCTATGGCTTTGTCTGGGAAACCACCTTGCTCGCCGCCGACCCGTTCATTCACCTGACCCAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGCCGTGAACGCCTGACGCTGGACCTGGGC  >  NC_002947/5856727‑5857023

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.