| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 86750 = | 85 (0.910) | 9 (0.110) | 6/218 | NT | 11.4% | intergenic (‑33/+112) | PP_0075/PP_0076 | choline sulfate transporter/choline betaine‑binding protein |
| ? | NC_002947 | 86841 = | 66 (0.810) | intergenic (‑124/+21) | PP_0075/PP_0076 | choline sulfate transporter/choline betaine‑binding protein | |||||
CCAAGGCCGATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/86908‑86750‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacaggg‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCATCGAAGCTGA > NC_002947/86841‑86986 CCAAGGCCGATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCT > 1:1723416/1‑150 CAAGGCCGATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTC > 1:1989532/1‑150 AGGCCGATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCC > 1:2190947/1‑150 AGGCCGATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCC > 1:219325/1‑150 CGATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCGAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAG > 1:1148722/1‑150 CGATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAG > 2:2161534/1‑150 GATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGG > 1:1762983/1‑150 CCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCA < 1:2337104/135‑1 CCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCA > 2:2337104/1‑135 CGCGCCCGCGAACACCAGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAA > 1:164575/1‑150 CCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGCTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCC‑CCAGGGCATCCCCAACTGCCTTGGTGGTAACTCCG > 1:122363/1‑150 CCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTT > 2:2333692/1‑101 CCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTT < 1:2333692/101‑1 CCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGG‑TTGGTGTGT < 2:1916992/80‑1 CCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGG‑TTGGTGTGT > 1:1916992/1‑80 CGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGCTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCG > 1:1190275/1‑150 gCACCGGCTTTGCCGGTGTCAAGCAACGCGTTGGCTTTTTCGCGGGCGCGCCCGCTCCCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCC > 2:1036262/2‑143 AAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGG > 1:505307/1‑150 GCCCGCTCCCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGC > 2:252151/1‑125 GCCCGCTCCCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGC < 1:252151/125‑1 CCCGCTCCCACAGGGCTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTT > 1:1669724/1‑150 CCCGCTCCCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGTCACCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTC < 1:1207922/150‑1 CCCGCTCCCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCGACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTC > 1:1657283/1‑150 CCGCTCCCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCA > 2:313497/1‑150 CCGCTCCCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCA < 2:1482772/66‑1 CCGCTCCCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCA > 1:1482772/1‑66 CGCTCCCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCAT > 2:1236776/1‑150 tctACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCATCGAA < 1:522715/147‑1 CCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCCCCCACCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCATCGAAG < 2:1672313/150‑1 CCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCATCGAAG < 1:1236776/150‑1 CCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCATCGAA < 1:2301787/149‑1 CCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCATCGAA > 2:2301787/1‑149 CACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCATCGAAGC > 2:240241/1‑150 CACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGG > 1:258016/1‑56 CACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGG < 2:258016/56‑1 AGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCATCGAAGCTGA > 1:898213/1‑150 CCAAGGCCGATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/86908‑86750‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacaggg‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCATCGAAGCTGA > NC_002947/86841‑86986 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |