New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1472865 | 79 (0.850) | 5 (0.060) | 5/232 | NT | 6.1% | intergenic (‑32/+46) | alg8/algD | glycosyltransferase Alg8/GDP‑mannose 6‑dehydrogenase |
? | NC_002947 | = 1472891 | 80 (0.920) | intergenic (‑58/+20) | alg8/algD | glycosyltransferase Alg8/GDP‑mannose 6‑dehydrogenase |
GTGCTTCGACTGCGAGTCGAAGATATCAGCTGGCAGGGCCAGGGCGATCAGCATGAGCAGGCTCATGTAGAGCAGCCACCCGGCGCACTGCAACAGCACTGTCTGGAGCCTTTGCATGTTCAGCATCCGTCGAGAATTCGGGAAAGGGTGGGCAGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1472708‑1472865 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcagcgaTGAGGCACTCGACAAGAGCCGCCTCCTCGCTGCCCACCCTTTCCCGAATTCTCGACGGATGCTGAACATGCAAAGGCTCCAGACAGTGCTGTTGCAGTGCGCCGGGTGGCTGCTCTACATGAGCCTGCTCATGCTGATCGCCCTGGC < NC_002947/1472891‑1472745 GTGCTTCGACTGCGAGTCGAAGATATCAGCTGGCAGGGCCAGGGCGATCAGCATGAGCAGGCTCATGTAGAGCAGCCACCCGGCGCACTGCAACAGCACTGTCTGGAGCCTTTGCATGTTCAGCATCCGTCGAGAATTCGGGAAAGGGTG > 2:341789/1‑150 CTTCGACTGCGAGTCGAAGATATCAGCTGGCAGGGCCAGGGCGATCAGCATGAGCAGGCTCATGTAGAGCAGCCACCCGGCGCACTGCAACAGCACTGTCTGGAGCCTTTGCATGTTCAGCATCCGTCGAGAATTCGGGAAAGGGTGGGC > 2:1678089/1‑150 ACTGCGAGTCGAAGATATCAGCTGGCAGGGCCAGGGCGATCAGCATGAGCAGGCTCATGTAGAGCAGCCACCCGGCGCACTGCAACAGCACTGTCTGGAGCCTTTGCATGTTCAGCATCCGTCGAGAATTCGGGAAAGGGTGGGCAGCGA < 2:1724783/150‑1 ACTGCGAGACGAAGACGTCAGCTGGCAGGGCCAGGGCGATCAGCATGAGCAGGCTCATGTAGAGCAGCCACCCGGCGCACTGCAACAGCACTGTCTGGAGCCTTTGCATGTTCAGCATCCGTCGAGAATTCGGGAAAGGGTGGGCAGCGA < 2:248967/150‑1 TCGAAGATATCAGCTGGCAGGGCCAGGGCGATCAGCATGAGCAGGCTCATGTAGAGCAGCCACCCGGCGCACTGCAACAGCACTGTCTGGAGCCTTTGCATGTTCAGCATCCGTCGAGAATTCGGGAAAGGGTGG > 1:1099084/1‑135 TCGAAGATATCAGCTGGCAGGGCCAGGGCGATCAGCATGAGCAGGCTCATGTAGAGCAGCCACCCGGCGCACTGCAACAGCACTGTCTGGAGCCTTTGCATGTTCAGCATCCGTCGAGAATTCGGGAAAGGGTGG < 2:1099084/135‑1 ATCAGCATGAGCAGGCTCATGTAGAGCAGCCACCCGGCGCACTGCAACAGCACTGTCTGGAGCCTTTGCATGTTCAGCATCCGTCGAGAATTCGGGAAAGGGCGGGCAGCGATGAGGCACTCGACAAGAGCCGCCTCCTCGCTGCCCACC < 1:1681284/150‑1 TGCAACAGCACTGTCTGGAGCCTTTGCATGTTCAGCATCCGTCGAGAATTCGGGAAAGGGTGGGCAGCG > 1:1140207/1‑69 TGCAACAGCACTGTCTGGAGCCTTTGCATGTTCAGCATCCGTCGAGAATTCGGGAAAGGGTGGGCAGCG < 2:1140207/69‑1 CAGCACTGTCTGGAGCCTTTGCATGTTCAGCATCCGTCGAGAATTCGGGAAAGGGTGGGCAGCGATGAGGCACTCGACAAGAGCCGCCTCC < 1:641312/91‑1 CAGCACTGTCTGGAGCCTTTGCATGTTCAGCATCCGTCGAGAATTCGGGAAAGGGTGGGCAGCGATGAGGCACTCGACAAGAGCCGCCTCC > 2:641312/1‑91 GGGAAAGGGTGGGCAGCGATGAGGCACTCGACAAGAGCCGCCTCCT > 1:881738/1‑46 GGGAAAGGGTGGGCAGCGATGAGGCACTCGACAAGAGCCGCCTCCT < 2:881738/46‑1 CGATGAGGCACTCGACAAGAGCCGCCTCCTCGCTGCCCACCCTTTCCCGAATTCTCGACGGATGCTGAACATGCAAAGGCTCCAGACAGTGCTGTTGCAGTGCGCCGGGTGGCTGCTCTACATGAGCCTGCTCATGCTGATCGCCCTGGC < 1:855164/150‑1 GTGCTTCGACTGCGAGTCGAAGATATCAGCTGGCAGGGCCAGGGCGATCAGCATGAGCAGGCTCATGTAGAGCAGCCACCCGGCGCACTGCAACAGCACTGTCTGGAGCCTTTGCATGTTCAGCATCCGTCGAGAATTCGGGAAAGGGTGGGCAGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1472708‑1472865 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcagcgaTGAGGCACTCGACAAGAGCCGCCTCCTCGCTGCCCACCCTTTCCCGAATTCTCGACGGATGCTGAACATGCAAAGGCTCCAGACAGTGCTGTTGCAGTGCGCCGGGTGGCTGCTCTACATGAGCCTGCTCATGCTGATCGCCCTGGC < NC_002947/1472891‑1472745 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |