New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 147286579 (0.850)5 (0.060) 5/232 NT 6.1% intergenic (‑32/+46) alg8/algD glycosyltransferase Alg8/GDP‑mannose 6‑dehydrogenase
?NC_002947 = 1472891 80 (0.920)intergenic (‑58/+20) alg8/algD glycosyltransferase Alg8/GDP‑mannose 6‑dehydrogenase

GTGCTTCGACTGCGAGTCGAAGATATCAGCTGGCAGGGCCAGGGCGATCAGCATGAGCAGGCTCATGTAGAGCAGCCACCCGGCGCACTGCAACAGCACTGTCTGGAGCCTTTGCATGTTCAGCATCCGTCGAGAATTCGGGAAAGGGTGGGCAGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1472708‑1472865
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcagcgaTGAGGCACTCGACAAGAGCCGCCTCCTCGCTGCCCACCCTTTCCCGAATTCTCGACGGATGCTGAACATGCAAAGGCTCCAGACAGTGCTGTTGCAGTGCGCCGGGTGGCTGCTCTACATGAGCCTGCTCATGCTGATCGCCCTGGC  <  NC_002947/1472891‑1472745
                                                                                                                                                                                                                                                                                                                 
GTGCTTCGACTGCGAGTCGAAGATATCAGCTGGCAGGGCCAGGGCGATCAGCATGAGCAGGCTCATGTAGAGCAGCCACCCGGCGCACTGCAACAGCACTGTCTGGAGCCTTTGCATGTTCAGCATCCGTCGAGAATTCGGGAAAGGGTG                                                                                                                                                             >  2:341789/1‑150
   CTTCGACTGCGAGTCGAAGATATCAGCTGGCAGGGCCAGGGCGATCAGCATGAGCAGGCTCATGTAGAGCAGCCACCCGGCGCACTGCAACAGCACTGTCTGGAGCCTTTGCATGTTCAGCATCCGTCGAGAATTCGGGAAAGGGTGGGC                                                                                                                                                          >  2:1678089/1‑150
        ACTGCGAGTCGAAGATATCAGCTGGCAGGGCCAGGGCGATCAGCATGAGCAGGCTCATGTAGAGCAGCCACCCGGCGCACTGCAACAGCACTGTCTGGAGCCTTTGCATGTTCAGCATCCGTCGAGAATTCGGGAAAGGGTGGGCAGCGA                                                                                                                                                     <  2:1724783/150‑1
        ACTGCGAGACGAAGACGTCAGCTGGCAGGGCCAGGGCGATCAGCATGAGCAGGCTCATGTAGAGCAGCCACCCGGCGCACTGCAACAGCACTGTCTGGAGCCTTTGCATGTTCAGCATCCGTCGAGAATTCGGGAAAGGGTGGGCAGCGA                                                                                                                                                     <  2:248967/150‑1
                TCGAAGATATCAGCTGGCAGGGCCAGGGCGATCAGCATGAGCAGGCTCATGTAGAGCAGCCACCCGGCGCACTGCAACAGCACTGTCTGGAGCCTTTGCATGTTCAGCATCCGTCGAGAATTCGGGAAAGGGTGG                                                                                                                                                            >  1:1099084/1‑135
                TCGAAGATATCAGCTGGCAGGGCCAGGGCGATCAGCATGAGCAGGCTCATGTAGAGCAGCCACCCGGCGCACTGCAACAGCACTGTCTGGAGCCTTTGCATGTTCAGCATCCGTCGAGAATTCGGGAAAGGGTGG                                                                                                                                                            <  2:1099084/135‑1
                                              ATCAGCATGAGCAGGCTCATGTAGAGCAGCCACCCGGCGCACTGCAACAGCACTGTCTGGAGCCTTTGCATGTTCAGCATCCGTCGAGAATTCGGGAAAGGGCGGGCAGCGATGAGGCACTCGACAAGAGCCGCCTCCTCGCTGCCCACC                                                                                                               <  1:1681284/150‑1
                                                                                        TGCAACAGCACTGTCTGGAGCCTTTGCATGTTCAGCATCCGTCGAGAATTCGGGAAAGGGTGGGCAGCG                                                                                                                                                      >  1:1140207/1‑69
                                                                                        TGCAACAGCACTGTCTGGAGCCTTTGCATGTTCAGCATCCGTCGAGAATTCGGGAAAGGGTGGGCAGCG                                                                                                                                                      <  2:1140207/69‑1
                                                                                             CAGCACTGTCTGGAGCCTTTGCATGTTCAGCATCCGTCGAGAATTCGGGAAAGGGTGGGCAGCGATGAGGCACTCGACAAGAGCCGCCTCC                                                                                                                           <  1:641312/91‑1
                                                                                             CAGCACTGTCTGGAGCCTTTGCATGTTCAGCATCCGTCGAGAATTCGGGAAAGGGTGGGCAGCGATGAGGCACTCGACAAGAGCCGCCTCC                                                                                                                           >  2:641312/1‑91
                                                                                                                                           GGGAAAGGGTGGGCAGCGATGAGGCACTCGACAAGAGCCGCCTCCT                                                                                                                          >  1:881738/1‑46
                                                                                                                                           GGGAAAGGGTGGGCAGCGATGAGGCACTCGACAAGAGCCGCCTCCT                                                                                                                          <  2:881738/46‑1
                                                                                                                                                           CGATGAGGCACTCGACAAGAGCCGCCTCCTCGCTGCCCACCCTTTCCCGAATTCTCGACGGATGCTGAACATGCAAAGGCTCCAGACAGTGCTGTTGCAGTGCGCCGGGTGGCTGCTCTACATGAGCCTGCTCATGCTGATCGCCCTGGC  <  1:855164/150‑1
                                                                                                                                                                                                                                                                                                                 
GTGCTTCGACTGCGAGTCGAAGATATCAGCTGGCAGGGCCAGGGCGATCAGCATGAGCAGGCTCATGTAGAGCAGCCACCCGGCGCACTGCAACAGCACTGTCTGGAGCCTTTGCATGTTCAGCATCCGTCGAGAATTCGGGAAAGGGTGGGCAGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1472708‑1472865
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcagcgaTGAGGCACTCGACAAGAGCCGCCTCCTCGCTGCCCACCCTTTCCCGAATTCTCGACGGATGCTGAACATGCAAAGGCTCCAGACAGTGCTGTTGCAGTGCGCCGGGTGGCTGCTCTACATGAGCCTGCTCATGCTGATCGCCCTGGC  <  NC_002947/1472891‑1472745

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.